Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060532.seq
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 73 1e-13
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 68 5e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 7e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 47 1e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 1e-04
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 42 5e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 42 5e-04
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 42 5e-04
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 42 5e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 41 7e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 41 7e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 41 0.001
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 41 0.001
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 41 0.001
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 40 0.001
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 40 0.001
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 40 0.001
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.002
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.002
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.005
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 38 0.009
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 38 0.009
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 36 0.027
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 35 0.046
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 33 0.25
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 33 0.25
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.33
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.76
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 30 1.3
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 30 1.3
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 30 1.3
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 30 1.3
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.7
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.3
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.0
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.0
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 7.0
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 73.3 bits (172), Expect = 1e-13
Identities = 30/55 (54%), Positives = 44/55 (80%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELATTKFSK 666
++++G+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA + +
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 FNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 445
F KNFY + + + EV+ YR + + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 446 GYKEPTPIQAQGWPIAMSGKN 508
Y +PT IQAQ P MSG++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRD 343
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 72.9 bits (171), Expect = 2e-13
Identities = 29/55 (52%), Positives = 45/55 (81%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELATTKFSK 666
++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA F +
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQE 357
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = +2
Query: 263 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 442
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 443 MGYKEPTPIQAQGWPIAMSGKN*LA*PK----RVPAKRWP 550
Y++PTPIQA P A+SG++ L K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/49 (59%), Positives = 40/49 (81%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
++++ +A+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELA
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELA 215
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/84 (34%), Positives = 51/84 (60%)
Frame = +2
Query: 257 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 436
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 437 KTMGYKEPTPIQAQGWPIAMSGKN 508
+++PT IQ+ WPIAMSG++
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRD 168
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +2
Query: 335 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRD 340
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 10/66 (15%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELA------T 651
++++GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELA T
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 652 TKFSKV 669
KF K+
Sbjct: 399 NKFGKL 404
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 54.4 bits (125), Expect = 7e-08
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Frame = +1
Query: 436 KDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 606
+ NG ++ S ++ +GV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 607 ---GPIALVLAPTRELA 648
P LVL+PTRELA
Sbjct: 160 QKPSPFVLVLSPTRELA 176
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 362 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKN 508
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQD 123
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELATTKFSKV 669
++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA F +
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLI 286
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 466
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 467 IQAQGWPIAMSGKN 508
IQ QG P+A+SG++
Sbjct: 216 IQIQGIPVALSGRD 229
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +1
Query: 436 KDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 615
KDN + +A S ++VG A+TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 616 ALVLAPTRELATTKFSKVAA 675
AL+++PTRELA FS + A
Sbjct: 151 ALIISPTRELALQTFSTINA 170
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 648
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 235
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 329 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 648
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 219
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 329 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 648
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 216
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 329 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELA 648
+++G A+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELA 472
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAT 651
K ++G A+TGSGKT A+++P + + + G GP A+++APT+EL T
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELIT 177
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 353 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
V +G +V PI F + + +++++ +KT GY PTP+Q P G++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRD 205
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELA 648
++L+ AQTGSGKT A+++P + I P R+ P ALVL+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
Query: 649 TTKFSK 666
F++
Sbjct: 264 LQIFNE 269
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +1
Query: 433 CKDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 612
C+ G + + L + K+++G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 613 IALVLAPTRELA 648
LVL PTRELA
Sbjct: 114 FCLVLTPTRELA 125
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/49 (40%), Positives = 37/49 (75%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
K+++ A+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELS 153
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELA 648
K+++ AQTGSGKT A++LP + + + + G +G P ++L PTRELA
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELA 648
K+++ AQTGSGKT A++LP + + + + G +G P ++L PTRELA
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELATTKFSKV 669
K++V +++TGSGKT A+++P + + R G AL+++PTRELA F V
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVV 113
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 377 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELATTKFSKV 669
K++V +++TGSGKT A+++P + + R G AL+++PTRELA F V
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVV 113
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 377 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTREL 645
++++G A+TGSGKTLA+ +P + + + + GP AL++APTREL
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTREL 80
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTREL 645
++++G A+TGSGKTLA+ +P + + + + GP AL++APTREL
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTREL 247
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 413 PDYVQQGVKTMGYKEPTPIQAQGWPIAM 496
P+ V + ++ MG+ EPT IQ+ P A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAV 190
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
+++G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELA 170
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
+++G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELA 170
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 648
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 34.3 bits (75), Expect = 0.081
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 648
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 34.3 bits (75), Expect = 0.081
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 648
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 34.3 bits (75), Expect = 0.081
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 645
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 645
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 645
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELATTKFS 663
++V A TGSGKTLA+++P ++ + ++ P L++APTREL F+
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELATTKFS 663
++V A TGSGKTLA+++P ++ + ++ P L++APTREL F+
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELATTKF 660
K++ A TG+GKT A++LP + + +P + LVL PTRELA F
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVF 236
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
FE+ N + + GY +PTPIQ P+A++GK+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKD 187
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +1
Query: 445 GLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 624
G ++ A + K+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 625 LAPTRELA 648
+APTRELA
Sbjct: 103 MAPTRELA 110
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +1
Query: 445 GLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 624
G ++ A + K+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 625 LAPTRELA 648
+APTRELA
Sbjct: 103 MAPTRELA 110
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAT 651
++V + TGSGKTLA++LP + I N G AL+L+P+REL +
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCS 94
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELATTKFSK 666
+ ++ A TGSGKTLA+ LP I+ + + + +A+VL PTRELA +++
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTE 223
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +1
Query: 439 DNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 618
+ G ++ + + + ++++ A+ G+GKT AY +P I I QP ++ A
Sbjct: 60 EKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---A 114
Query: 619 LVLAPTRELA 648
+V+ PTRELA
Sbjct: 115 MVIVPTRELA 124
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
++++ AQ+G+GKT + + + ++ Q +R AL+L+PTRELA
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELA 107
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
++++ AQ+G+GKT + + + ++ Q +R AL+L+PTRELA
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELA 107
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQP 588
+++ A TGSGKT+ Y+LP + + ++P
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +1
Query: 520 AQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELATTKFSK 666
A TG GKT A+++PAI + + +P I P L+LA T L F++
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQLFNR 188
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -2
Query: 269 KVGVKRIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 90
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 89 IPVTRHDYFSDLVEDVYLNYGFFLTQ 12
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -2
Query: 269 KVGVKRIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 90
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 89 IPVTRHDYFSDLVEDVYLNYGFFLTQ 12
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -2
Query: 269 KVGVKRIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 90
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 89 IPVTRHDYFSDLVEDVYLNYGFFLTQ 12
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -2
Query: 269 KVGVKRIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 90
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 89 IPVTRHDYFSDLVEDVYLNYGFFLTQ 12
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 11 PASERIHSLNKHLQLNPKNNHVW 79
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 97 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 213
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 508 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
L+ AQ+G+GKT A++L + I+ P + LAPT ELA
Sbjct: 251 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELA 292
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 508 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
L+ AQ+G+GKT A++L + I+ P + LAPT ELA
Sbjct: 276 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELA 317
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 508 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
L+ AQ+G+GKT A++L + I+ P + LAPT ELA
Sbjct: 660 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELA 701
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVH 573
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 508 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 329
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 328 D 326
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 508 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 329
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 328 D 326
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 152 RRIIAEFVASSKFGTTVSTAIIPV 81
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 152 RRIIAEFVASSKFGTTVSTAIIPV 81
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 187 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 279
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 290 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 448
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 290 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 448
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 187 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 279
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,355,984
Number of Sequences: 27780
Number of extensions: 336261
Number of successful extensions: 1106
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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