Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060531.seq
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   5.3  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   5.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 42  RLIQFEHYISSCVTIIKEKLEKTQLLCH 125
           RLI F+       T+I  K  K +LLC+
Sbjct: 109 RLIHFDTKCQENSTVIDYKRHKKRLLCY 136


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 42  RLIQFEHYISSCVTIIKEKLEKTQLLCH 125
           RLI F+       T+I  K  K +LLC+
Sbjct: 127 RLIHFDTKCQENSTVIDYKRHKKRLLCY 154


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -3

Query: 568 DHDISNVLPGHHCPLLVGP-NC 506
           D + + ++PG + P  VGP NC
Sbjct: 403 DENKAKIVPGTYMPFGVGPRNC 424


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 243 ASTLNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQ 407
           +  L RP+    +P  D  LA P+F + +   D S L    +K        PTD+
Sbjct: 323 SEVLQRPKPF--KPITDFELAVPSFLKLQRGSDISKLVAKNIKEFYYGNEEPTDK 375


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 243 ASTLNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQ 407
           +  L RP+    +P  D  LA P+F + +   D S L    +K        PTD+
Sbjct: 323 SEVLQRPKPF--KPITDFELAVPSFLKLQRGSDISKLVAKNIKEFYYGNEEPTDK 375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,933
Number of Sequences: 336
Number of extensions: 2936
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)