BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060531.seq
(678 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10323-1|AAA20993.1| 406|Homo sapiens NF45 protein protein. 100 5e-21
BC000382-1|AAH00382.1| 390|Homo sapiens interleukin enhancer bi... 100 5e-21
AY099265-1|AAM45141.1| 390|Homo sapiens interleukin enhancer bi... 100 5e-21
AL713889-3|CAI13612.1| 390|Homo sapiens interleukin enhancer bi... 100 5e-21
AL713889-2|CAI13611.1| 150|Homo sapiens interleukin enhancer bi... 100 5e-21
AL592150-1|CAI18796.1| 390|Homo sapiens interleukin enhancer bi... 100 5e-21
AK223326-1|BAD97046.1| 390|Homo sapiens interleukin enhancer bi... 99 7e-21
AL713889-1|CAI13610.1| 115|Homo sapiens interleukin enhancer bi... 90 6e-18
AK122591-1|BAC56932.1| 600|Homo sapiens FLJ00417 protein protein. 31 5.0
>U10323-1|AAA20993.1| 406|Homo sapiens NF45 protein protein.
Length = 406
Score = 100 bits (239), Expect = 5e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 285 PFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVV 464
PFD L E AFPR KPAPD++ ++ALLKR+ +L P+ +QA++LSLVTK+ V+DN++V
Sbjct: 31 PFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVIDNLIV 90
Query: 465 APGEFAACQLEEVRQLGPTRRG 530
APG F Q+EEVRQ+G ++G
Sbjct: 91 APGTFEV-QIEEVRQVGSYKKG 111
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +2
Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
VGSYKKGTM G NVAD+VVI+K LPT EAV L NKV
Sbjct: 105 VGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKV 142
>BC000382-1|AAH00382.1| 390|Homo sapiens interleukin enhancer
binding factor 2, 45kDa protein.
Length = 390
Score = 100 bits (239), Expect = 5e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 285 PFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVV 464
PFD L E AFPR KPAPD++ ++ALLKR+ +L P+ +QA++LSLVTK+ V+DN++V
Sbjct: 31 PFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVIDNLIV 90
Query: 465 APGEFAACQLEEVRQLGPTRRG 530
APG F Q+EEVRQ+G ++G
Sbjct: 91 APGTFEV-QIEEVRQVGSYKKG 111
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +2
Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
VGSYKKGTM G NVAD+VVI+K LPT EAV L NKV
Sbjct: 105 VGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKV 142
>AY099265-1|AAM45141.1| 390|Homo sapiens interleukin enhancer
binding factor 2 protein.
Length = 390
Score = 100 bits (239), Expect = 5e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 285 PFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVV 464
PFD L E AFPR KPAPD++ ++ALLKR+ +L P+ +QA++LSLVTK+ V+DN++V
Sbjct: 31 PFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVIDNLIV 90
Query: 465 APGEFAACQLEEVRQLGPTRRG 530
APG F Q+EEVRQ+G ++G
Sbjct: 91 APGTFEV-QIEEVRQVGSYKKG 111
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +2
Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
VGSYKKGTM G NVAD+VVI+K LPT EAV L NKV
Sbjct: 105 VGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKV 142
>AL713889-3|CAI13612.1| 390|Homo sapiens interleukin enhancer
binding factor 2, 45kDa protein.
Length = 390
Score = 100 bits (239), Expect = 5e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 285 PFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVV 464
PFD L E AFPR KPAPD++ ++ALLKR+ +L P+ +QA++LSLVTK+ V+DN++V
Sbjct: 31 PFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVIDNLIV 90
Query: 465 APGEFAACQLEEVRQLGPTRRG 530
APG F Q+EEVRQ+G ++G
Sbjct: 91 APGTFEV-QIEEVRQVGSYKKG 111
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +2
Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
VGSYKKGTM G NVAD+VVI+K LPT EAV L NKV
Sbjct: 105 VGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKV 142
>AL713889-2|CAI13611.1| 150|Homo sapiens interleukin enhancer
binding factor 2, 45kDa protein.
Length = 150
Score = 100 bits (239), Expect = 5e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 285 PFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVV 464
PFD L E AFPR KPAPD++ ++ALLKR+ +L P+ +QA++LSLVTK+ V+DN++V
Sbjct: 31 PFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVIDNLIV 90
Query: 465 APGEFAACQLEEVRQLGPTRRG 530
APG F Q+EEVRQ+G ++G
Sbjct: 91 APGTFEV-QIEEVRQVGSYKKG 111
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +2
Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKE 595
VGSYKKGTM G NVAD+VVI+K LPT E
Sbjct: 105 VGSYKKGTMTTGHNVADLVVILKILPTCE 133
>AL592150-1|CAI18796.1| 390|Homo sapiens interleukin enhancer
binding factor 2, 45kDa protein.
Length = 390
Score = 100 bits (239), Expect = 5e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 285 PFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVV 464
PFD L E AFPR KPAPD++ ++ALLKR+ +L P+ +QA++LSLVTK+ V+DN++V
Sbjct: 31 PFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVIDNLIV 90
Query: 465 APGEFAACQLEEVRQLGPTRRG 530
APG F Q+EEVRQ+G ++G
Sbjct: 91 APGTFEV-QIEEVRQVGSYKKG 111
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +2
Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
VGSYKKGTM G NVAD+VVI+K LPT EAV L NKV
Sbjct: 105 VGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKV 142
>AK223326-1|BAD97046.1| 390|Homo sapiens interleukin enhancer
binding factor 2 variant protein.
Length = 390
Score = 99 bits (238), Expect = 7e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 285 PFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVV 464
PFD L E AFPR KPAPD++ ++ALLKR+ +L P+ +QA++LSLVTK+ V+DN++V
Sbjct: 31 PFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVVDNLIV 90
Query: 465 APGEFAACQLEEVRQLGPTRRG 530
APG F Q+EEVRQ+G ++G
Sbjct: 91 APGTFEV-QIEEVRQVGSYKKG 111
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +2
Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
VGSYKKGTM G NVAD+VVI+K LPT EAV L NKV
Sbjct: 105 VGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKV 142
>AL713889-1|CAI13610.1| 115|Homo sapiens interleukin enhancer
binding factor 2, 45kDa protein.
Length = 115
Score = 90.2 bits (214), Expect = 6e-18
Identities = 40/73 (54%), Positives = 58/73 (79%)
Frame = +3
Query: 312 AFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGEFAACQ 491
AFPR KPAPD++ ++ALLKR+ +L P+ +QA++LSLVTK+ V+DN++VAPG F Q
Sbjct: 2 AFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVIDNLIVAPGTFEV-Q 60
Query: 492 LEEVRQLGPTRRG 530
+EEVRQ+G ++G
Sbjct: 61 IEEVRQVGSYKKG 73
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +2
Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
VGSYKKGTM G NVAD+VVI+K LPT EAV L NKV
Sbjct: 67 VGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKV 104
>AK122591-1|BAC56932.1| 600|Homo sapiens FLJ00417 protein protein.
Length = 600
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 222 PRSGRDGASTLNRPRVLMLRPPFD--LLLAEPAFPRCKPAPDDSVLTQALL 368
PR G GA RP+ +L PP D L PA P + P +VL+ +++
Sbjct: 13 PRQGTPGAPGAERPQSSLLLPPVDGRPQLVIPASPSFQLLPPPTVLSPSMM 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,313,058
Number of Sequences: 237096
Number of extensions: 1986051
Number of successful extensions: 8323
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8312
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -