Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060531.seq
         (678 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p pro...   102   4e-22
AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA...   102   4e-22
BT001578-1|AAN71333.1| 1002|Drosophila melanogaster RE23622p pro...    31   1.9  
AY134669-1|AAN39118.1|  968|Drosophila melanogaster peptidylprol...    31   1.9  
AY051595-1|AAK93019.1|  685|Drosophila melanogaster GH23813p pro...    31   1.9  
AJ130871-1|CAA10224.1| 1464|Drosophila melanogaster Bazooka prot...    31   1.9  
AE014298-2531|ABI30988.1| 1520|Drosophila melanogaster CG5055-PB...    31   1.9  
AE014298-2530|AAF48703.1| 1464|Drosophila melanogaster CG5055-PA...    31   1.9  
AE014297-4231|AAF56787.2|  685|Drosophila melanogaster CG1866-PB...    31   1.9  
AE014297-4230|AAF56786.1|  970|Drosophila melanogaster CG1866-PA...    31   1.9  

>AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p
           protein.
          Length = 396

 Score =  102 bits (245), Expect = 4e-22
 Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
 Frame = +3

Query: 225 RSGRDGASTLNRP--RVLMLRPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCP 392
           R GR     +  P  +  + R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P
Sbjct: 7   RGGRPMRGGIRPPFKKTFVPRHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSP 66

Query: 393 SPTDQAAVLSLVTKLQTVLDNIVVAPGEFAACQLEEVRQLGPTRRG 530
           +P++Q A+ +LVTK+Q VLDN+VVAPG+   CQLEEVRQ+G  ++G
Sbjct: 67  TPSEQTAIGNLVTKVQAVLDNLVVAPGDLTTCQLEEVRQVGSFKKG 112



 Score = 62.1 bits (144), Expect = 7e-10
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = +2

Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
           VGS+KKGT++ G NVAD+VVI+KTLPTKEAV+ L+ KV
Sbjct: 106 VGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKV 143


>AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA
           protein.
          Length = 396

 Score =  102 bits (245), Expect = 4e-22
 Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
 Frame = +3

Query: 225 RSGRDGASTLNRP--RVLMLRPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCP 392
           R GR     +  P  +  + R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P
Sbjct: 7   RGGRPMRGGIRPPFKKTFVPRHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSP 66

Query: 393 SPTDQAAVLSLVTKLQTVLDNIVVAPGEFAACQLEEVRQLGPTRRG 530
           +P++Q A+ +LVTK+Q VLDN+VVAPG+   CQLEEVRQ+G  ++G
Sbjct: 67  TPSEQTAIGNLVTKVQAVLDNLVVAPGDLTTCQLEEVRQVGSFKKG 112



 Score = 62.1 bits (144), Expect = 7e-10
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = +2

Query: 509 VGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKV 622
           VGS+KKGT++ G NVAD+VVI+KTLPTKEAV+ L+ KV
Sbjct: 106 VGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKV 143


>BT001578-1|AAN71333.1| 1002|Drosophila melanogaster RE23622p
           protein.
          Length = 1002

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 504 RQLGPTRRGQ*WPGRTLLISWSS*KPCQRKRLSRDSPIRLTEEVNKLMKAEAAVQW 671
           RQ  P++R Q  PGR    S S  +P   +R  RDSP R  ++ +   K EA+  W
Sbjct: 663 RQDSPSQRRQLSPGRKRQDSPSKKRPNSTERKWRDSPERKRDDSHD-RKREASPNW 717


>AY134669-1|AAN39118.1|  968|Drosophila melanogaster peptidylprolyl
           cis-trans isomerase protein.
          Length = 968

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 504 RQLGPTRRGQ*WPGRTLLISWSS*KPCQRKRLSRDSPIRLTEEVNKLMKAEAAVQW 671
           RQ  P++R Q  PGR    S S  +P   +R  RDSP R  ++ +   K EA+  W
Sbjct: 629 RQDSPSQRRQLSPGRKRQDSPSKKRPNSTERKWRDSPERKRDDSHD-RKREASPNW 683


>AY051595-1|AAK93019.1|  685|Drosophila melanogaster GH23813p
           protein.
          Length = 685

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 504 RQLGPTRRGQ*WPGRTLLISWSS*KPCQRKRLSRDSPIRLTEEVNKLMKAEAAVQW 671
           RQ  P++R Q  PGR    S S  +P   +R  RDSP R  ++ +   K EA+  W
Sbjct: 346 RQDSPSQRRQLSPGRKRQDSPSKKRPNSTERKWRDSPERKRDDSHD-RKREASPNW 400


>AJ130871-1|CAA10224.1| 1464|Drosophila melanogaster Bazooka protein
           protein.
          Length = 1464

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 527 GTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNRGGEQADE 649
           GT M GK   D+V I++ +P    V  + ++     EQAD+
Sbjct: 499 GTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQ 539


>AE014298-2531|ABI30988.1| 1520|Drosophila melanogaster CG5055-PB,
           isoform B protein.
          Length = 1520

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 527 GTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNRGGEQADE 649
           GT M GK   D+V I++ +P    V  + ++     EQAD+
Sbjct: 520 GTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQ 560


>AE014298-2530|AAF48703.1| 1464|Drosophila melanogaster CG5055-PA,
           isoform A protein.
          Length = 1464

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 527 GTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNRGGEQADE 649
           GT M GK   D+V I++ +P    V  + ++     EQAD+
Sbjct: 499 GTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQ 539


>AE014297-4231|AAF56787.2|  685|Drosophila melanogaster CG1866-PB,
           isoform B protein.
          Length = 685

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 504 RQLGPTRRGQ*WPGRTLLISWSS*KPCQRKRLSRDSPIRLTEEVNKLMKAEAAVQW 671
           RQ  P++R Q  PGR    S S  +P   +R  RDSP R  ++ +   K EA+  W
Sbjct: 346 RQDSPSQRRQLSPGRKRQDSPSKKRPNSTERKWRDSPERKRDDSHD-RKREASPNW 400


>AE014297-4230|AAF56786.1|  970|Drosophila melanogaster CG1866-PA,
           isoform A protein.
          Length = 970

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 504 RQLGPTRRGQ*WPGRTLLISWSS*KPCQRKRLSRDSPIRLTEEVNKLMKAEAAVQW 671
           RQ  P++R Q  PGR    S S  +P   +R  RDSP R  ++ +   K EA+  W
Sbjct: 631 RQDSPSQRRQLSPGRKRQDSPSKKRPNSTERKWRDSPERKRDDSHD-RKREASPNW 685


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,350,022
Number of Sequences: 53049
Number of extensions: 605103
Number of successful extensions: 1504
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)