Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060531.seq
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.7  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   4.7  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   4.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   4.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   4.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 192 ARHRSWWTRYPRSGRDGASTLNRPR 266
           A+  +W T   + GRD  ST  +PR
Sbjct: 417 AQEPAWKTHVWKKGRDKKSTSKKPR 441


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
 Frame = -1

Query: 678 RFTIAPLL-----QPSSACSPPRLTLLESPSTASFVGKVFMMTTISATFFPAI 535
           R  +AP+L      P+    PP L    +P+     G+  ++   S  F PAI
Sbjct: 194 RDKVAPILVRARETPNYTACPPTLACPLNPNPQPLTGQQELLQDFSKRFSPAI 246


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 231 GRDGASTLNRPRVLMLRPPFDLLL 302
           G D  STL R RV+ +RP  + +L
Sbjct: 101 GSDDYSTLIRVRVIDVRPQNETIL 124


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 231 GRDGASTLNRPRVLMLRPPFDLLL 302
           G D  STL R RV+ +RP  + +L
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETIL 172


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 231 GRDGASTLNRPRVLMLRPPFDLLL 302
           G D  STL R RV+ +RP  + +L
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETIL 172


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 231 GRDGASTLNRPRVLMLRPPFDLLL 302
           G D  STL R RV+ +RP  + +L
Sbjct: 149 GSDDYSTLIRVRVIDVRPQNETIL 172


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 47  NTIRTLYKLVRNNN*RKIRENTTSMSLT 130
           NTI  + KLV   N  KI  ++ + +LT
Sbjct: 513 NTIVDISKLVNKRNNAKIYTSSVNSNLT 540


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,362
Number of Sequences: 438
Number of extensions: 3398
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)