Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060529.seq
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.9  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   6.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   6.6  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   8.7  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 368 DIKPPR-DVKKKNGIDSYNPSTSSRELN 448
           D + PR D K+K G    NPS++ R  N
Sbjct: 511 DCRSPRLDRKRKTGTKKRNPSSNDRSPN 538


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 485 TPESFRKADLSSNHLKKMT 541
           T  S  K D++ NHLKK+T
Sbjct: 386 TSSSQSKRDIAKNHLKKVT 404


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 527 LKKMTTIHYLLEVIXSDYHHSKXY 598
           LKK T +  L+  + S+Y +SK Y
Sbjct: 709 LKKYTGLRNLIRELKSEYGNSKIY 732


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 527 LKKMTTIHYLLEVIXSDYHHSKXY 598
           LKK T +  L+  + S+Y +SK Y
Sbjct: 709 LKKYTGLRNLIRELKSEYGNSKIY 732


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +2

Query: 281 VEKESSIVQKETREDWMAMTGLLKTYSKQDIKPPRDVKKKNGIDSYNPSTSSRELNP--Y 454
           VE E  +V+K +++  M    LLK    Q+ K PR + +       +      E +P  +
Sbjct: 484 VEVEK-VVKKVSKDVDMLFGDLLKNKGAQNYKTPRQIAENELHQYLSVENIDLENDPLLW 542

Query: 455 WKD 463
           WK+
Sbjct: 543 WKE 545


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,292
Number of Sequences: 2352
Number of extensions: 9534
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)