Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060527.seq
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    27   0.55 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   2.2  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   3.0  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   3.0  
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           23   6.8  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   9.0  

>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -3

Query: 493 AAVLSVGMGPRSSIGSPITLM 431
           +A+L+ G+GPR+ IGS   LM
Sbjct: 463 SAMLAFGLGPRNCIGSRFALM 483


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 24  ISENVGGNKSSWKR 65
           I  N+GG KSSW+R
Sbjct: 739 IMPNIGGPKSSWRR 752


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 417 TLGRIINVIGEPIDERGPIPTDKTAAIHAEAQSLSTCLC 533
           TLG       + +DE GP+       +H +A + S  +C
Sbjct: 249 TLGTTNTCAFDRLDEIGPVANQYNVWVHVDAYAGSAFIC 287


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 417 TLGRIINVIGEPIDERGPIPTDKTAAIHAEAQSLSTCLC 533
           TLG       + +DE GP+       +H +A + S  +C
Sbjct: 280 TLGTTNTCAFDRLDEIGPVANQYNVWVHVDAYAGSAFIC 318


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 350 FSTVHGNGPNCVLTQMLGYLKYEAGRSILHL 258
           +S   GN  NC+   ++G  + E     LHL
Sbjct: 70  YSKTTGNSGNCIACAIIGVAREEYFAERLHL 100


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 496 IAAVLSVGMGPRSSIGSPITLM 431
           + A L  G+GPR+ I S   LM
Sbjct: 462 LGAYLPFGIGPRNCIASRFALM 483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,490
Number of Sequences: 2352
Number of extensions: 16253
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)