Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060526.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    30   0.020
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    30   0.020
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   1.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.4  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 29.9 bits (64), Expect = 0.020
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +3

Query: 264 RQDQQRKSRTAPMGRMRKIHAVHPNLLTYTAKLFDTRSSF 383
           RQ+ Q +++  P G ++ +  +H NL+T + ++ D+ S F
Sbjct: 202 RQNSQTRNQAVPTGTIKTLVQMHSNLVTTSEEVCDSFSIF 241


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 29.9 bits (64), Expect = 0.020
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +3

Query: 264 RQDQQRKSRTAPMGRMRKIHAVHPNLLTYTAKLFDTRSSF 383
           RQ+ Q +++  P G ++ +  +H NL+T + ++ D+ S F
Sbjct: 202 RQNSQTRNQAVPTGTIKTLVQMHSNLVTTSEEVCDSFSIF 241


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 250 LKDVVLQGMELFI 212
           LK+VVL G+ELFI
Sbjct: 293 LKNVVLYGLELFI 305


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = -3

Query: 426 CLIRAAVPLSRPDRRTTTGYRRVWRYMSADWDG----LREFYASYPWGR 292
           C  +      R  +R    Y ++W  + A WD     +R+F  S+  G+
Sbjct: 75  CTEKQRTAAYRSIKRLKKEYPKIWEQLRAVWDPDDVFIRKFETSFESGK 123


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 183 RPPTGTSEEGINNSIPWSTTSLRRPH 260
           RPP  T       S+P S +S RR H
Sbjct: 212 RPPQETPVLASYKSVPMSFSSPRRRH 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,060
Number of Sequences: 336
Number of extensions: 3736
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)