Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060526.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    26   0.97 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.0  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    24   5.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.8  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   6.8  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    23   9.0  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   9.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.0  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 482 VVSRRSNKEARAPRYLGQRVGCVXSWEKPXXXAKS*AVRTXKSV-VLXPNHS 634
           V++    +  R+ RYLG  +    SW+       + A+RT K++  L  NHS
Sbjct: 739 VINGVERRTTRSIRYLGVVIDNQLSWKSHVEYCTTKALRTAKALGCLMRNHS 790


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +3

Query: 168  YQGLLRPPTGTSEEGINNSIPWSTTSLRRPHRRQDQQRKSRTAPMG 305
            +QG  R P G +   ++++   +  S + PH         R+ P G
Sbjct: 1372 FQGSHRSPNGCAPNLLSSTTSTTNFSYQHPHPHHHHNGSGRSKPPG 1417


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 626 WGQEPLTSGFGLPTISL 576
           W + P    FGLPT+SL
Sbjct: 290 WFRVPYPGQFGLPTVSL 306


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +2

Query: 209 GNKQFHPLEHHVFKTAXQTSGSAEEKQN 292
           G    HP  HH +    + + SA+  +N
Sbjct: 192 GTMSMHPQTHHSWAACMELAASADPSRN 219


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
 Frame = +2

Query: 431 SDDPRGGRP--PHCIRAGSVVSRRSNKEARAPRYLGQRVGCVXSWEKP 568
           S+ P    P  PHC   G+ +           RY G   GCV  ++ P
Sbjct: 276 SEPPSTPHPTDPHCPPTGATLPNYWAHGTDCSRYYGCLEGCVKEFKCP 323


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 494 FC*PQIRPGYSVVVALLLDRLITALFVLPY 405
           FC  Q  PG    VA  LD + T +FV  Y
Sbjct: 334 FCGTQNLPGVYTNVAKYLDWMETVMFVERY 363


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 164 VIPGSAATPNGHFRRGNKQFHPLEHH 241
           V PG  +T NG     +   HP  HH
Sbjct: 481 VSPGMGSTVNGASLTHSHHAHPHHHH 506


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 216  NNSIPWSTTSLRRPHRRQDQQRKSRTA 296
            + S P    ++RR  RR++ +R  RTA
Sbjct: 1167 SRSAPSEADTIRRRMRRREMERLRRTA 1193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,137
Number of Sequences: 2352
Number of extensions: 17495
Number of successful extensions: 50
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)