Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060523.seq
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q95US6 Cluster: Transposase; n=1; Ceratitis rosa|Rep: T...    50   7e-05
UniRef50_A2EDZ9 Cluster: Surface antigen BspA-like; n=1; Trichom...    38   0.30 
UniRef50_Q47W78 Cluster: Putative chemotaxis protein; n=1; Colwe...    33   4.9  
UniRef50_Q7PTR2 Cluster: ENSANGP00000016355; n=2; Culicidae|Rep:...    33   4.9  
UniRef50_Q7XPY5 Cluster: OSJNBa0004N05.23 protein; n=3; Oryza sa...    33   6.5  
UniRef50_Q1GGR2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q95US6 Cluster: Transposase; n=1; Ceratitis rosa|Rep:
           Transposase - Ceratitis rosa (Natal fruit fly)
          Length = 361

 Score = 49.6 bits (113), Expect = 7e-05
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 26/139 (18%)
 Frame = -1

Query: 402 NSLRRILSRDLKLNPHKIQLVQELKEVDFTKILEFA------SLMLDQFSQ--YKNIPSH 247
           +S+  I+ +DL L+ +K+QL QELK +D +K  E+A      + + DQFS+    +  +H
Sbjct: 103 SSMMNIMHKDLHLHAYKVQLAQELKPLDHSKRREWAEWFQEMATVDDQFSKKIIFSDEAH 162

Query: 246 HHN---ITKRDTF*HEWICEQTNMIVSARV---------------VIGSYFFENVRGEAV 121
            H    + K++     W  E   +IV   V               +IG YFF+N  G+AV
Sbjct: 163 LHLSGFVNKQNC--RIWANENPRVIVEKPVHPQRVTVWCGLWAGGIIGPYFFQNEAGQAV 220

Query: 120 TVNSKRYVGMLRDLLGLEL 64
           TVN  RY  M+ + L  +L
Sbjct: 221 TVNGVRYREMITNFLWPQL 239


>UniRef50_A2EDZ9 Cluster: Surface antigen BspA-like; n=1;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 1213

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 22/72 (30%), Positives = 40/72 (55%)
 Frame = +2

Query: 164 TTLADTIIFVCSQIHSCQKVSLFVML**CDGMFLY*ENWSSIKDANSSILVKSTSFSSCT 343
           TT+   + F CS +H+  K+ +  ++   D  F Y  + +SI   + +I V S +FS+C 
Sbjct: 625 TTIPKNLFFNCSSLHTFNKIGIISVI--EDHAFSYCSSLNSIAFTSDTINVGSNAFSNCV 682

Query: 344 S*ILCGLSFKSR 379
             +L  +SF+S+
Sbjct: 683 --LLNSISFESQ 692


>UniRef50_Q47W78 Cluster: Putative chemotaxis protein; n=1;
           Colwellia psychrerythraea 34H|Rep: Putative chemotaxis
           protein - Colwellia psychrerythraea (strain 34H / ATCC
           BAA-681) (Vibriopsychroerythus)
          Length = 202

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 27/92 (29%), Positives = 46/92 (50%)
 Frame = -1

Query: 342 VQELKEVDFTKILEFASLMLDQFSQYKNIPSHHHNITKRDTF*HEWICEQTNMIVSARVV 163
           +QEL  +   +  +  +  LD F  Y  +PS   ++  +D    + + +Q N +  A V 
Sbjct: 14  LQELINIAMGQASDQLARYLDTFV-YLKVPSIE-SVEAKDLM--KTLSQQKNTV--AVVS 67

Query: 162 IGSYFFENVRGEAVTVNSKRYVGMLRDLLGLE 67
            G + +E +RGEA+ V  +   G + DLLG E
Sbjct: 68  QGFFGYEGIRGEALLVYKEENSGRIADLLGYE 99


>UniRef50_Q7PTR2 Cluster: ENSANGP00000016355; n=2; Culicidae|Rep:
           ENSANGP00000016355 - Anopheles gambiae str. PEST
          Length = 844

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 30/122 (24%), Positives = 55/122 (45%)
 Frame = +2

Query: 29  ITSTNLYQQVFGXXXXXXXXXIPTYRLELTVTASPRTFSKKYDPITTLADTIIFVCSQIH 208
           ITS  +Y++VFG           T +   T TA P T +    P+TT   T +  C QI 
Sbjct: 349 ITSA-VYREVFGTGAPTPGTTTTTAKTTTTSTARPITTTTTQRPLTTTTTTPV-QCRQI- 405

Query: 209 SCQKVSLFVML**CDGMFLY*ENWSSIKDANSSILVKSTSFSSCTS*ILCGLSFKSRDKI 388
                + F +L   D +F + +N ++ +  +  + ++  + + CT+ +   ++  S   I
Sbjct: 406 ----TNQFTVL-ISDKVFCFFDNKATYRVGDGKVTIEDINPNLCTNIVYSSITLTSTGSI 460

Query: 389 LL 394
            L
Sbjct: 461 KL 462


>UniRef50_Q7XPY5 Cluster: OSJNBa0004N05.23 protein; n=3; Oryza
           sativa|Rep: OSJNBa0004N05.23 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 360

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = -1

Query: 435 ID*LFDFGDYPNSLRRILSRDL-KLNPHKIQLVQELKEVDFTKILEFASL 289
           +D +F FG+YP  +R ILS +L K  P + +L+Q   +VDF  I ++ ++
Sbjct: 140 LDPIF-FGEYPREMREILSSNLPKFTPEEKKLLQ--NKVDFIGINQYTAI 186


>UniRef50_Q1GGR2 Cluster: Putative uncharacterized protein; n=1;
           Silicibacter sp. TM1040|Rep: Putative uncharacterized
           protein - Silicibacter sp. (strain TM1040)
          Length = 471

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = -1

Query: 210 EWICEQTNMIVSARVVIGSYFFENVR---GEAVTVNSKRYVGMLRDLLGLELPKTCWY-K 43
           EWI +    + S+  V  S   +++R    EA+  NS+R +G+L +  GLE    C    
Sbjct: 356 EWIAQVMRTVYSSATVYASKLGDSMRLQSYEALVQNSEREIGLLLEHAGLEYNAACLTPN 415

Query: 42  FVDVIPEVGTTL 7
            +  +P++ T L
Sbjct: 416 ALCDVPQIATML 427


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,294,210
Number of Sequences: 1657284
Number of extensions: 12088211
Number of successful extensions: 27442
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27437
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)