Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060523.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   3.9  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   3.9  
DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        24   5.1  
AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.      24   5.1  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -1

Query: 606 NYCXNVIMRGLFRVE*NLRSICKHQFN*AVAKEFQQTG 493
           N    ++ +G  R   N+RS  +  +   + K++++TG
Sbjct: 151 NAASGMVRKGPIRAPANIRSTVRWDYQPDICKDYKETG 188


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -1

Query: 606 NYCXNVIMRGLFRVE*NLRSICKHQFN*AVAKEFQQTG 493
           N    ++ +G  R   N+RS  +  +   + K++++TG
Sbjct: 151 NAASGMVRKGPIRAPANIRSTVRWDYQPDICKDYKETG 188


>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 632 RSSCKLFTIIIVPT*SCEVCLELNKICGVYAST 534
           +S+CKLFT  +V + +C++   +    G Y ++
Sbjct: 39  QSTCKLFTADVVSSITCKMYCVIKGKTGGYCNS 71


>AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.
          Length = 80

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 632 RSSCKLFTIIIVPT*SCEVCLELNKICGVYAST 534
           +S+CKLFT  +V + +C++   +    G Y ++
Sbjct: 26  QSTCKLFTADVVSSITCKMYCVIKGKTGGYCNS 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,802
Number of Sequences: 2352
Number of extensions: 13207
Number of successful extensions: 51
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)