Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060523.seq
         (684 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ556693-1|CAD89420.1|  122|Homo sapiens immunoglobulin gamma he...    31   2.9  
AJ556691-1|CAD89418.1|  122|Homo sapiens immunoglobulin gamma he...    31   2.9  
Y12034-1|CAA72765.1|   88|Homo sapiens immunoglobulin heavy chai...    30   8.8  
CR533565-1|CAG38596.1|  632|Homo sapiens RACGAP1 protein.              30   8.8  
BC032754-1|AAH32754.1|  632|Homo sapiens RACGAP1 protein protein.      30   8.8  
AK022726-1|BAB14206.1|  255|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AK000733-1|BAA91347.1|  632|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AB040911-1|BAA96002.1|  570|Homo sapiens KIAA1478 protein protein.     30   8.8  
AB030251-1|BAA90247.1|  632|Homo sapiens GTPase activating prote...    30   8.8  

>AJ556693-1|CAD89420.1|  122|Homo sapiens immunoglobulin gamma heavy
           chain variable region protein.
          Length = 122

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 104 RLELTVTASPRTFSKKYDPITTLADTIIFVCSQIHSCQKVSLF 232
           R+ ++V  S   FS K   +T  ADT ++ C+++HS   V+ F
Sbjct: 68  RVTISVDTSKNQFSLKLSSVTA-ADTAVYYCARLHSGWYVNYF 109


>AJ556691-1|CAD89418.1|  122|Homo sapiens immunoglobulin gamma heavy
           chain variable region protein.
          Length = 122

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 104 RLELTVTASPRTFSKKYDPITTLADTIIFVCSQIHSCQKVSLF 232
           R+ ++V  S   FS K   +T  ADT ++ C+++HS   V+ F
Sbjct: 68  RVTISVDTSKNQFSLKLSSVTA-ADTAVYYCARLHSGWYVNYF 109


>Y12034-1|CAA72765.1|   88|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 88

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 104 RLELTVTASPRTFSKKYDPITTLADTIIFVCSQIHS 211
           R+ ++V  S   FS K   +T  ADT ++ C+ +HS
Sbjct: 42  RVTISVDTSKNQFSLKLSSVTA-ADTAVYYCATVHS 76


>CR533565-1|CAG38596.1|  632|Homo sapiens RACGAP1 protein.
          Length = 632

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 566 LNKICGVYASTNLIKQWLKNFNKPVLHYRENVKF 465
           L+K+  ++A  +L+K +L+N  +P+L +R N  F
Sbjct: 409 LSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAF 442


>BC032754-1|AAH32754.1|  632|Homo sapiens RACGAP1 protein protein.
          Length = 632

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 566 LNKICGVYASTNLIKQWLKNFNKPVLHYRENVKF 465
           L+K+  ++A  +L+K +L+N  +P+L +R N  F
Sbjct: 409 LSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAF 442


>AK022726-1|BAB14206.1|  255|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12664 fis, clone NT2RM4002226, weakly similar to
           GTPASE ACTIVATING PROTEIN ROTUND. ).
          Length = 255

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 566 LNKICGVYASTNLIKQWLKNFNKPVLHYRENVKF 465
           L+K+  ++A  +L+K +L+N  +P+L +R N  F
Sbjct: 32  LSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAF 65


>AK000733-1|BAA91347.1|  632|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20726 fis, clone HEP13735. ).
          Length = 632

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 566 LNKICGVYASTNLIKQWLKNFNKPVLHYRENVKF 465
           L+K+  ++A  +L+K +L+N  +P+L +R N  F
Sbjct: 409 LSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAF 442


>AB040911-1|BAA96002.1|  570|Homo sapiens KIAA1478 protein protein.
          Length = 570

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 566 LNKICGVYASTNLIKQWLKNFNKPVLHYRENVKF 465
           L+K+  ++A  +L+K +L+N  +P+L +R N  F
Sbjct: 347 LSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAF 380


>AB030251-1|BAA90247.1|  632|Homo sapiens GTPase activating protein
           protein.
          Length = 632

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 566 LNKICGVYASTNLIKQWLKNFNKPVLHYRENVKF 465
           L+K+  ++A  +L+K +L+N  +P+L +R N  F
Sbjct: 409 LSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAF 442


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,730,425
Number of Sequences: 237096
Number of extensions: 1762778
Number of successful extensions: 7067
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7067
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)