Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060521.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 97 8e-21
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 97 8e-21
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 97 8e-21
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 74 8e-14
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 74 8e-14
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 56 2e-08
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 54 9e-08
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 54 9e-08
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 51 7e-07
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 51 7e-07
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 48 8e-06
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 41 0.001
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 41 0.001
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 1.0
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 1.0
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 97.5 bits (232), Expect = 8e-21
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
LKSIGVDNPAAK+LVDMS QD EVGDGTTSVTV KL+ Q++HPQTII+G+
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 436 RIASDAAKQALAEASFDHQKNLNEVH*EWI*KTSHGTTLSSKXLFXSQGAFHQIS 600
R A A+++L ++S + N+ + + K + TTL SK L + F Q++
Sbjct: 128 RRALGIAQESLKKSSIESGDNIRDD----LLKIAR-TTLGSKILSQHKEHFAQLA 177
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCG-RNSGQVEVTN 241
P++ILK+ R+SSF+GAIAIGDLVKSTLGPKGMDKIL+S ++G ++VTN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 242 DGAT 253
DGAT
Sbjct: 63 DGAT 66
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 560 RXFSNHKEHFTKLAVDAVLRLKXSGNXKAIQIIQISGGXLEE 685
+ S HKEHF +LAVDAVLRLK SGN AIQII+ GG + E
Sbjct: 164 KILSQHKEHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSMNE 205
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 97.5 bits (232), Expect = 8e-21
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
LKSIGVDNPAAK+LVDMS QD EVGDGTTSVTV KL+ Q++HPQTII+G+
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 436 RIASDAAKQALAEASFDHQKNLNEVH*EWI*KTSHGTTLSSKXLFXSQGAFHQIS 600
R A A+++L ++S + N+ + + K + TTL SK L + F Q++
Sbjct: 128 RRALGIAQESLKKSSIESGDNIRDD----LLKIAR-TTLGSKILSQHKEHFAQLA 177
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCG-RNSGQVEVTN 241
P++ILK+ R+SSF+GAIAIGDLVKSTLGPKGMDKIL+S ++G ++VTN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 242 DGAT 253
DGAT
Sbjct: 63 DGAT 66
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 560 RXFSNHKEHFTKLAVDAVLRLKXSGNXKAIQIIQISGGXLEE 685
+ S HKEHF +LAVDAVLRLK SGN AIQII+ GG + E
Sbjct: 164 KILSQHKEHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSMNE 205
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 97.5 bits (232), Expect = 8e-21
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
LKSIGVDNPAAK+LVDMS QD EVGDGTTSVTV KL+ Q++HPQTII+G+
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 436 RIASDAAKQALAEASFDHQKNLNEVH*EWI*KTSHGTTLSSKXLFXSQGAFHQIS 600
R A A+++L ++S + N+ + + K + TTL SK L + F Q++
Sbjct: 128 RRALGIAQESLKKSSIESGDNIRDD----LLKIAR-TTLGSKILSQHKEHFAQLA 177
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCG-RNSGQVEVTN 241
P++ILK+ R+SSF+GAIAIGDLVKSTLGPKGMDKIL+S ++G ++VTN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 242 DGAT 253
DGAT
Sbjct: 63 DGAT 66
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 560 RXFSNHKEHFTKLAVDAVLRLKXSGNXKAIQIIQISGGXLEE 685
+ S HKEHF +LAVDAVLRLK SGN AIQII+ GG + E
Sbjct: 164 KILSQHKEHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSMNE 205
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 74.1 bits (174), Expect = 8e-14
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
LK + V++PA K+LV+++++QDEEVGDGTTSV + +L++QK+HP TII G+
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 436 RIASDAAKQALAE 474
R+A A + ++E
Sbjct: 126 RLACKEAVKYISE 138
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +2
Query: 116 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
R + A+AI ++VKS+LGP G+DK+LV + G V VTNDGAT
Sbjct: 22 RSQNVTAAVAIANIVKSSLGPVGLDKMLVD---DVGDVIVTNDGAT 64
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 74.1 bits (174), Expect = 8e-14
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
LK + V++PA K+LV+++++QDEEVGDGTTSV + +L++QK+HP TII G+
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 436 RIASDAAKQALAE 474
R+A A + ++E
Sbjct: 126 RLACKEAVKYISE 138
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +2
Query: 116 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
R + A+AI ++VKS+LGP G+DK+LV + G V VTNDGAT
Sbjct: 22 RSQNVTAAVAIANIVKSSLGPVGLDKMLVD---DVGDVIVTNDGAT 64
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
L+ I V +PAAK ++++++ QDEE GDGTTSV + +EQK HP II +
Sbjct: 69 LREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAY 128
Query: 436 RIA 444
R A
Sbjct: 129 RQA 131
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
L + V +P AK+LV++SK QD E GDGTT+V V L+ + +HP TI +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 436 RIASDAAKQALAEAS 480
+ A+ A++ L E S
Sbjct: 137 QSAAAEAEKILDEMS 151
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2
Query: 116 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
R S+ + A A+ D V+++LGP+GMDK++ S +G V +TNDGAT
Sbjct: 33 RNSNIVAAKAVADAVRTSLGPRGMDKMIQS---GNGDVTITNDGAT 75
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
L + V +P AK+LV++SK QD E GDGTT+V V L+ + +HP TI +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 436 RIASDAAKQALAEAS 480
+ A+ A++ L E S
Sbjct: 137 QSAAAEAEKILDEMS 151
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2
Query: 116 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
R S+ + A A+ D V+++LGP+GMDK++ S +G V +TNDGAT
Sbjct: 33 RNSNIVAAKAVADAVRTSLGPRGMDKMIQS---GNGDVTITNDGAT 75
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 54.0 bits (124), Expect = 9e-08
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
++ + V + AK++V++SK QD E+GDGTT V V KLI++ +HP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 436 RIASDAAKQALAEAS 480
+A A + L S
Sbjct: 139 DLACKKALETLDSIS 153
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +2
Query: 122 SSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
S + A A+ + ++++LGP+G+DK+LVS G V +TNDGAT
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVS---PDGDVTITNDGAT 77
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 54.0 bits (124), Expect = 9e-08
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
++ + V + AK++V++SK QD E+GDGTT V V KLI++ +HP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 436 RIASDAAKQALAEAS 480
+A A + L S
Sbjct: 139 DLACKKALETLDSIS 153
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +2
Query: 122 SSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
S + A A+ + ++++LGP+G+DK+LVS G V +TNDGAT
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVS---PDGDVTITNDGAT 77
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 54.0 bits (124), Expect = 9e-08
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
++ + V + AK++V++SK QD E+GDGTT V V KLI++ +HP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 436 RIASDAAKQALAEAS 480
+A A + L S
Sbjct: 139 DLACKKALETLDSIS 153
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +2
Query: 122 SSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
S + A A+ + ++++LGP+G+DK+LVS G V +TNDGAT
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVS---PDGDVTITNDGAT 77
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 51.2 bits (117), Expect = 7e-07
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
LK + + PAA +VD+++ QD EVGDGTTSV V IE +HPQ +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 436 RIASDAAKQALA--EASFDHQKNLNEVH*EWI*KTSHGTTLSSK 561
A + + LA E + + L E+ + K + TTLSSK
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREM----LVKCA-ATTLSSK 164
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 65 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTND 244
PI +LK+ +S+ + D +++TLGP+G+DK++V + G ++ND
Sbjct: 5 PIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVD---SKGATTISND 61
Query: 245 GAT 253
GAT
Sbjct: 62 GAT 64
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 51.2 bits (117), Expect = 7e-07
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
LK + + PAA +VD+++ QD EVGDGTTSV V IE +HPQ +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 436 RIASDAAKQALA--EASFDHQKNLNEVH*EWI*KTSHGTTLSSK 561
A + + LA E + + L E+ + K + TTLSSK
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREM----LVKCA-ATTLSSK 164
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 65 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTND 244
PI +LK+ +S+ + D +++TLGP+G+DK++V + G ++ND
Sbjct: 5 PIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVD---SKGATTISND 61
Query: 245 GAT 253
GAT
Sbjct: 62 GAT 64
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
LK + + +PAA+I++ +++Q++++GD T +V + LI + PQ + AG+
Sbjct: 72 LKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGY 131
Query: 436 RIASDAAKQ---ALAEASFDHQKNLNEV 510
A++ A + L KN+ EV
Sbjct: 132 EQAAEKALEILPTLVVKEATDMKNIEEV 159
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
L + + +P A ++ S QD+ GDGTTS + L+ + LHP+ + G+
Sbjct: 64 LHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
Query: 436 RIASDAAKQAL 468
A+ + L
Sbjct: 124 EWANTKTLELL 134
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 134 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDG 247
GA + D+++S LGPKG K+LVS +G +++T DG
Sbjct: 26 GARGLQDVMRSNLGPKGTLKMLVS---GAGDIKLTKDG 60
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 256 LKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGW 435
L + + +P A ++ S QD+ GDGTTS + L+ + LHP+ + G+
Sbjct: 64 LHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
Query: 436 RIASDAAKQAL 468
A+ + L
Sbjct: 124 EWANTKTLELL 134
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 134 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDG 247
GA + D+++S LGPKG K+LVS +G +++T DG
Sbjct: 26 GARGLQDVMRSNLGPKGTLKMLVS---GAGDIKLTKDG 60
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 116 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
R + +G + D V T+GPKG + I+ ++ G ++T DG T
Sbjct: 28 RQAMLVGVNLLADAVSVTMGPKGRNVII---EQSWGSPKITKDGVT 70
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 277 NPAAKILVDMSKVQDEEVGDGTTSVTV 357
N AK++ D++ +EE GDGTT TV
Sbjct: 83 NLGAKLIQDVANKANEEAGDGTTCATV 109
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 116 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGAT 253
R + +G + D V T+GPKG + I+ ++ G ++T DG T
Sbjct: 28 RQAMLVGVNLLADAVSVTMGPKGRNVII---EQSWGSPKITKDGVT 70
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 277 NPAAKILVDMSKVQDEEVGDGTTSVTV 357
N AK++ D++ +EE GDGTT TV
Sbjct: 83 NLGAKLIQDVANKANEEAGDGTTCATV 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,969,188
Number of Sequences: 27780
Number of extensions: 222236
Number of successful extensions: 382
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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