Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060519.seq
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VXT5 Cluster: CG9213-PA; n=2; Sophophora|Rep: CG9213-...    62   9e-09
UniRef50_Q7PFI1 Cluster: ENSANGP00000024116; n=3; Culicidae|Rep:...    56   8e-07
UniRef50_UPI0000D55CFD Cluster: PREDICTED: similar to CG9213-PA;...    56   1e-06
UniRef50_UPI0000DB7E40 Cluster: PREDICTED: similar to CG9213-PA;...    44   0.005
UniRef50_UPI0000E486F4 Cluster: PREDICTED: similar to CWF19-like...    42   0.011
UniRef50_Q28C44 Cluster: CWF19-like 2, cell cycle control; n=2; ...    39   0.098
UniRef50_Q2TBE0 Cluster: CWF19-like protein 2; n=31; Eumetazoa|R...    38   0.30 
UniRef50_UPI000065F5D9 Cluster: CWF19-like 2, cell cycle control...    34   3.7  
UniRef50_UPI000049A05A Cluster: hypothetical protein 310.t00005;...    33   4.9  

>UniRef50_Q9VXT5 Cluster: CG9213-PA; n=2; Sophophora|Rep: CG9213-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 687

 Score = 62.5 bits (145), Expect = 9e-09
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 318 REDWMAMTGLL-KTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           R+DWM    LL KT+S++  +P +  +K   ID+Y+P+ S RELNPYWK  G+ LP
Sbjct: 154 RDDWMTSESLLLKTFSRERKEPAKPNEKAQQIDAYDPAKSGRELNPYWKSNGTGLP 209


>UniRef50_Q7PFI1 Cluster: ENSANGP00000024116; n=3; Culicidae|Rep:
           ENSANGP00000024116 - Anopheles gambiae str. PEST
          Length = 594

 Score = 56.0 bits (129), Expect = 8e-07
 Identities = 35/69 (50%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = +3

Query: 309 KETREDWMAMTGLLKTYSKQDIKPPRDVKKXNGIDS---YNPSTSSRELNPYWKDGGSXL 479
           K  REDWM    L+ TYS++  K   D K     D    Y+P TS RELNPYWK+GGS L
Sbjct: 76  KLEREDWMNSM-LIPTYSREPKK--EDKKNSTPADQQQQYDPKTSVRELNPYWKNGGSGL 132

Query: 480 PQTPESFRK 506
           P    SFRK
Sbjct: 133 P----SFRK 137


>UniRef50_UPI0000D55CFD Cluster: PREDICTED: similar to CG9213-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG9213-PA - Tribolium castaneum
          Length = 549

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +3

Query: 285 KKKVQYVXKETREDWMAMTGLLKTYSKQDIKPPRDVKKX--NGIDSYNPSTSSRELNPYW 458
           K K +      RE+WM++     T S  D +  R+  K      + YNP + SRELNPYW
Sbjct: 47  KNKPKEKSSTDREEWMSLPSSFLTESHLDRRRNREENKRWEREREQYNPRSHSRELNPYW 106

Query: 459 KDGGSXLPQ 485
           KDGG  LP+
Sbjct: 107 KDGGDGLPK 115


>UniRef50_UPI0000DB7E40 Cluster: PREDICTED: similar to CG9213-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG9213-PA
           - Apis mellifera
          Length = 596

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +3

Query: 318 REDWMAMTGLLK-TYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLPQTPE 494
           REDWM +  +L   ++++  +     K  +  D    + + +ELNPYWK+GG+ LP+   
Sbjct: 70  REDWMNIKSILPCVFNEKKKEFSNSDKNIDKSDMNKLNQNKKELNPYWKNGGNGLPEKNS 129

Query: 495 SFRKADLSSXHLKK 536
           +  +  +    LKK
Sbjct: 130 TNAQPKIDINWLKK 143


>UniRef50_UPI0000E486F4 Cluster: PREDICTED: similar to CWF19-like 2,
           cell cycle control (S. pombe); n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to CWF19-like 2, cell
           cycle control (S. pombe) - Strongylocentrotus purpuratus
          Length = 730

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = +3

Query: 309 KETREDWMAMTGLLKTYSKQDIKPPRDVKKXNGIDSY----NPSTSSRELNPYWKDGGSX 476
           K+   +W+    L    S  DI+  ++ +K    +      +   S+RELNPYWK+GG+ 
Sbjct: 6   KDGEGNWLESPFLTAATSVADIRKKKNAEKEKEREKTKNLADADYSARELNPYWKEGGTG 65

Query: 477 LPQTPESFR 503
           LP+  E+ R
Sbjct: 66  LPEDEETSR 74


>UniRef50_Q28C44 Cluster: CWF19-like 2, cell cycle control; n=2;
           Xenopus tropicalis|Rep: CWF19-like 2, cell cycle control
           - Xenopus tropicalis (Western clawed frog) (Silurana
           tropicalis)
          Length = 922

 Score = 39.1 bits (87), Expect = 0.098
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
 Frame = +3

Query: 291 KVQYVXKET-REDWMAMTGL-LKTYSKQDIKPPRDVKKXNGIDSYNPSTS----SRELNP 452
           K +   K T R++WM +  + LK  S   ++  +  +K    +    + +    SRELNP
Sbjct: 137 KAEVPEKSTERDEWMTLDFMSLKATSAAAMRAEKQKEKTLEHEKAQAAETEKLLSRELNP 196

Query: 453 YWKDGGSXLP 482
           YWKDGG+ LP
Sbjct: 197 YWKDGGTGLP 206


>UniRef50_Q2TBE0 Cluster: CWF19-like protein 2; n=31; Eumetazoa|Rep:
           CWF19-like protein 2 - Homo sapiens (Human)
          Length = 740

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 324 DWMAMTGLLKTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           D+M++  +  +  K + +  R +++             RELNPYWKDGG+ LP
Sbjct: 4   DFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLP 56


>UniRef50_UPI000065F5D9 Cluster: CWF19-like 2, cell cycle control;
           n=1; Takifugu rubripes|Rep: CWF19-like 2, cell cycle
           control - Takifugu rubripes
          Length = 664

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +3

Query: 441 ELNPYWKDGGSXLP 482
           ELNPYWKDGG+ LP
Sbjct: 43  ELNPYWKDGGTGLP 56


>UniRef50_UPI000049A05A Cluster: hypothetical protein 310.t00005;
           n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 310.t00005 - Entamoeba histolytica HM-1:IMSS
          Length = 139

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 299 LNFLFQPIALNQNLKTX*VNNM--CFFFTLKLFRLMRFILVLFLFHF 165
           +N   Q   LNQ LK    +    C FF  KLF ++ FIL+ F+ HF
Sbjct: 93  VNRSIQQWTLNQLLKGNKQSKFVSCLFFIFKLFIIISFILLAFIIHF 139


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,935,119
Number of Sequences: 1657284
Number of extensions: 6829851
Number of successful extensions: 14425
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14422
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)