Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060519.seq
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC118669-1|AAI18670.1|  740|Homo sapiens CWF19-like 2, cell cycl...    38   0.044
BC110442-1|AAI10443.2|  740|Homo sapiens CWF19-like 2, cell cycl...    38   0.044
BC110441-1|AAI10442.1|  518|Homo sapiens CWF19L2 protein protein.      38   0.044
BC110440-1|AAI10441.1|  603|Homo sapiens CWF19L2 protein protein.      38   0.044
BC110439-1|AAI10440.1|  588|Homo sapiens CWF19L2 protein protein.      38   0.044
AK056905-1|BAB71307.1|  740|Homo sapiens protein ( Homo sapiens ...    38   0.044

>BC118669-1|AAI18670.1|  740|Homo sapiens CWF19-like 2, cell cycle
           control (S. pombe) protein.
          Length = 740

 Score = 37.5 bits (83), Expect = 0.044
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 324 DWMAMTGLLKTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           D+M++  +  +  K + +  R +++             RELNPYWKDGG+ LP
Sbjct: 4   DFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLP 56


>BC110442-1|AAI10443.2|  740|Homo sapiens CWF19-like 2, cell cycle
           control (S. pombe) protein.
          Length = 740

 Score = 37.5 bits (83), Expect = 0.044
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 324 DWMAMTGLLKTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           D+M++  +  +  K + +  R +++             RELNPYWKDGG+ LP
Sbjct: 4   DFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLP 56


>BC110441-1|AAI10442.1|  518|Homo sapiens CWF19L2 protein protein.
          Length = 518

 Score = 37.5 bits (83), Expect = 0.044
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 324 DWMAMTGLLKTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           D+M++  +  +  K + +  R +++             RELNPYWKDGG+ LP
Sbjct: 4   DFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLP 56


>BC110440-1|AAI10441.1|  603|Homo sapiens CWF19L2 protein protein.
          Length = 603

 Score = 37.5 bits (83), Expect = 0.044
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 324 DWMAMTGLLKTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           D+M++  +  +  K + +  R +++             RELNPYWKDGG+ LP
Sbjct: 4   DFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLP 56


>BC110439-1|AAI10440.1|  588|Homo sapiens CWF19L2 protein protein.
          Length = 588

 Score = 37.5 bits (83), Expect = 0.044
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 324 DWMAMTGLLKTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           D+M++  +  +  K + +  R +++             RELNPYWKDGG+ LP
Sbjct: 4   DFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLP 56


>AK056905-1|BAB71307.1|  740|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32343 fis, clone PROST2006260, weakly similar to
           SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
          Length = 740

 Score = 37.5 bits (83), Expect = 0.044
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 324 DWMAMTGLLKTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           D+M++  +  +  K + +  R +++             RELNPYWKDGG+ LP
Sbjct: 4   DFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLP 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,831,517
Number of Sequences: 237096
Number of extensions: 1026727
Number of successful extensions: 1561
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)