Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060519.seq
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061353-1|AAL28901.1|  687|Drosophila melanogaster LD28117p pro...    62   5e-10
AE014298-2173|AAF48473.2|  687|Drosophila melanogaster CG9213-PA...    62   5e-10

>AY061353-1|AAL28901.1|  687|Drosophila melanogaster LD28117p
           protein.
          Length = 687

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 318 REDWMAMTGLL-KTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           R+DWM    LL KT+S++  +P +  +K   ID+Y+P+ S RELNPYWK  G+ LP
Sbjct: 154 RDDWMTSESLLLKTFSRERKEPAKPNEKAQQIDAYDPAKSGRELNPYWKSNGTGLP 209


>AE014298-2173|AAF48473.2|  687|Drosophila melanogaster CG9213-PA
           protein.
          Length = 687

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 318 REDWMAMTGLL-KTYSKQDIKPPRDVKKXNGIDSYNPSTSSRELNPYWKDGGSXLP 482
           R+DWM    LL KT+S++  +P +  +K   ID+Y+P+ S RELNPYWK  G+ LP
Sbjct: 154 RDDWMTSESLLLKTFSRERKEPAKPNEKAQQIDAYDPAKSGRELNPYWKSNGTGLP 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,685,547
Number of Sequences: 53049
Number of extensions: 307127
Number of successful extensions: 639
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)