Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060518.seq
(684 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061353-1|AAL28901.1| 687|Drosophila melanogaster LD28117p pro... 50 4e-06
AE014298-2173|AAF48473.2| 687|Drosophila melanogaster CG9213-PA... 50 4e-06
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 29 4.5
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 29 4.5
M36114-1|AAA28627.1| 651|Drosophila melanogaster protein ( D.me... 29 7.8
L01500-1|AAB59186.1| 651|Drosophila melanogaster heat shock pro... 29 7.8
BT023894-1|ABA81828.1| 651|Drosophila melanogaster LP19893p pro... 29 7.8
AY084193-1|AAL89931.1| 651|Drosophila melanogaster RH04426p pro... 29 7.8
AE014297-1972|AAO41568.1| 651|Drosophila melanogaster CG4264-PF... 29 7.8
AE014297-1971|AAO41567.1| 651|Drosophila melanogaster CG4264-PE... 29 7.8
AE014297-1970|AAN13639.1| 651|Drosophila melanogaster CG4264-PD... 29 7.8
AE014297-1969|AAN13638.1| 651|Drosophila melanogaster CG4264-PC... 29 7.8
AE014297-1968|AAN13637.1| 651|Drosophila melanogaster CG4264-PB... 29 7.8
AE014297-1967|AAF55150.1| 651|Drosophila melanogaster CG4264-PA... 29 7.8
>AY061353-1|AAL28901.1| 687|Drosophila melanogaster LD28117p
protein.
Length = 687
Score = 49.6 bits (113), Expect = 4e-06
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = +3
Query: 252 KSSNSDSEQWVEKE-----SSIVQKETXE--DWMAMTGIL-KTYXKQDIKRPRDVXKKNG 407
+ ++ ++WVE ++ +KE + DWM +L KT+ ++ + + K
Sbjct: 125 RKESASEDEWVEAPPPLAADNVTKKEPPQRDDWMTSESLLLKTFSRERKEPAKPNEKAQQ 184
Query: 408 IDSYNTSTSSRELNPXWKDGGSGL 479
ID+Y+ + S RELNP WK G+GL
Sbjct: 185 IDAYDPAKSGRELNPYWKSNGTGL 208
>AE014298-2173|AAF48473.2| 687|Drosophila melanogaster CG9213-PA
protein.
Length = 687
Score = 49.6 bits (113), Expect = 4e-06
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = +3
Query: 252 KSSNSDSEQWVEKE-----SSIVQKETXE--DWMAMTGIL-KTYXKQDIKRPRDVXKKNG 407
+ ++ ++WVE ++ +KE + DWM +L KT+ ++ + + K
Sbjct: 125 RKESASEDEWVEAPPPLAADNVTKKEPPQRDDWMTSESLLLKTFSRERKEPAKPNEKAQQ 184
Query: 408 IDSYNTSTSSRELNPXWKDGGSGL 479
ID+Y+ + S RELNP WK G+GL
Sbjct: 185 IDAYDPAKSGRELNPYWKSNGTGL 208
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 380 SLNVLFXVCFQYTCHCHPVFSSFFLHY*TF 291
+L +F VC +Y HP SFF+H TF
Sbjct: 78 NLTDVFNVCRKYNLKLHPEKCSFFMHEVTF 107
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 380 SLNVLFXVCFQYTCHCHPVFSSFFLHY*TF 291
+L +F VC +Y HP SFF+H TF
Sbjct: 78 NLTDVFNVCRKYNLKLHPEKCSFFMHEVTF 107
>M36114-1|AAA28627.1| 651|Drosophila melanogaster protein (
D.melanogaster heatshock cognate 4 (hsc4) gene, exon 2.
).
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>L01500-1|AAB59186.1| 651|Drosophila melanogaster heat shock
protein cognate 70 protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>BT023894-1|ABA81828.1| 651|Drosophila melanogaster LP19893p
protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>AY084193-1|AAL89931.1| 651|Drosophila melanogaster RH04426p
protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>AE014297-1972|AAO41568.1| 651|Drosophila melanogaster CG4264-PF,
isoform F protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>AE014297-1971|AAO41567.1| 651|Drosophila melanogaster CG4264-PE,
isoform E protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>AE014297-1970|AAN13639.1| 651|Drosophila melanogaster CG4264-PD,
isoform D protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>AE014297-1969|AAN13638.1| 651|Drosophila melanogaster CG4264-PC,
isoform C protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>AE014297-1968|AAN13637.1| 651|Drosophila melanogaster CG4264-PB,
isoform B protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
>AE014297-1967|AAF55150.1| 651|Drosophila melanogaster CG4264-PA,
isoform A protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 246 LIKSSNSDSEQWVEKESSIVQKETXEDWMAMTGILKTYXKQDIKRPRDVXKKNGIDSY 419
L +S+N +++ + + + KE E M + Y +D K+ + KNG++SY
Sbjct: 491 LERSTNKENKITITNDKGRLSKEDIE---RMVNEAEKYRNEDEKQKETIAAKNGLESY 545
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,416,695
Number of Sequences: 53049
Number of extensions: 305734
Number of successful extensions: 842
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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