Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060517.seq
(655 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 28 0.30
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 27 0.39
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 27 0.68
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 27 0.68
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 27 0.68
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 1.6
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 1.6
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 2.1
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 25 2.8
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 24 3.7
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 24 3.7
X98185-1|CAA66860.1| 123|Anopheles gambiae histone H2B protein. 24 4.8
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 6.4
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 6.4
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 23 8.4
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 23 8.4
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 8.4
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 8.4
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 27.9 bits (59), Expect = 0.30
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 652 DFNAHHQEWLGSRTTDLPGRTAYDFALAYGFSQL 551
DFNA H EW GSR +L G G S L
Sbjct: 123 DFNAWHTEW-GSRRNNLRGEELLQMVEVLGLSIL 155
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 27.5 bits (58), Expect = 0.39
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 652 DFNAHHQEWLGSRTTD 605
DFNA H+EW RT D
Sbjct: 134 DFNARHEEWGSPRTCD 149
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 26.6 bits (56), Expect = 0.68
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = +3
Query: 252 GRTDV--RISRGKAEPPPWVGCVKFTQSIPIC*HIPPNSSIPGRRSTIRTREWYGSTNKA 425
GRT + I+ P S PI PP SSI RR T T++
Sbjct: 499 GRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPP-SSIVSRRRFFNTSASSSVTSEG 557
Query: 426 VIRRSKRSVDHHTVSG 473
I ++ D+H G
Sbjct: 558 TITPDLQTFDYHDEGG 573
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 26.6 bits (56), Expect = 0.68
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = +3
Query: 252 GRTDV--RISRGKAEPPPWVGCVKFTQSIPIC*HIPPNSSIPGRRSTIRTREWYGSTNKA 425
GRT + I+ P S PI PP SSI RR T T++
Sbjct: 500 GRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPP-SSIVSRRRFFNTSASSSVTSEG 558
Query: 426 VIRRSKRSVDHHTVSG 473
I ++ D+H G
Sbjct: 559 TITPDLQTFDYHDEGG 574
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 26.6 bits (56), Expect = 0.68
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 651 TLTLTTKSGWGPEPLTSRVGLPTISPWPTASPSW*HSPP--VSQISRGTSFFVGPS 490
T+ TT + P P+ +GLP +P PS + P + + S FF G S
Sbjct: 576 TMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPSSAAAAPYVLPRASEVNDFFYGAS 631
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 25.4 bits (53), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 652 DFNAHHQEWLGSRTTDLPGRTAYDFALAYG 563
DFNA H+EW GSR ++ G + + G
Sbjct: 180 DFNAWHEEW-GSRRSNERGEVLLEASQQLG 208
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 25.4 bits (53), Expect = 1.6
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 651 TLTLTTKSGWGPEPLTSRVGLPTISPWPTASPSW*HSPP--VSQISRGTSFFVG 496
T+ TT + P P+ +GLP +P PS + P + + S FF G
Sbjct: 577 TMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPSSAAAAPYVLPRASEVNDFFYG 630
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 25.0 bits (52), Expect = 2.1
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -1
Query: 652 DFNAHHQEWLGSRTTDLPGRTAYDFALAYGFSQLVTQPTRVPDIEGHELLCWTFC*PQIR 473
DFNA H +W SRT G A G L+ + +P +G+ F P R
Sbjct: 122 DFNAMHLDWGSSRTCP-KGLELLQLADNLGL-VLLNKADCLPTFKGNRADTNRF--PPSR 177
Query: 472 PDTVWWSTL--RLD 437
PD + S++ RLD
Sbjct: 178 PDVTFASSVISRLD 191
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 24.6 bits (51), Expect = 2.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 645 TLTTKSGWGPEPLTSRVGLPTISPWPTASPSW 550
+++ KS P P+ +VG+P P P A P +
Sbjct: 158 SVSEKSKTVPVPVFQKVGVPVPHPVPIAVPHY 189
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 24.2 bits (50), Expect = 3.7
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 391 GRESGTAARIRQ*SDDPSGASTTTLYPAGSVVSRRSNKEARAPRY 525
G ES A+ S + + L+PA +R S++ + PRY
Sbjct: 440 GMESSDDAKSETSSTKDGSENGSNLWPAWVYCTRYSDRPSSGPRY 484
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 24.2 bits (50), Expect = 3.7
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 391 GRESGTAARIRQ*SDDPSGASTTTLYPAGSVVSRRSNKEARAPRY 525
G ES A+ S + + L+PA +R S++ + PRY
Sbjct: 440 GMESSDDAKSETSSTKDGSENGSNLWPAWVYCTRYSDRPSSGPRY 484
>X98185-1|CAA66860.1| 123|Anopheles gambiae histone H2B protein.
Length = 123
Score = 23.8 bits (49), Expect = 4.8
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 242 SLRRSHRRQDQQRKSRTAPMGRMRKIHAVHPNLLTYTAKLFDTRSSF-DDQDERVVRQ 412
++ +S +++ ++ + R P+ + + VHP+ ++K +SF +D ER+ R+
Sbjct: 19 NISKSDKKKKRKTRKRATPIYIYKVLKQVHPDT-GISSKAMSIMNSFVNDIFERIARK 75
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.4 bits (48), Expect = 6.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 174 PWYNNASRDAARLKRSAYVAWDNARRRRDPNI 79
PW + + R+KR+AY + R +R +I
Sbjct: 405 PWADRTLKRLKRVKRAAYRHYQTRRCQRSRSI 436
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 23.4 bits (48), Expect = 6.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 215 NNSIPWSTTSLRRSHRRQDQQRKSRTA 295
+ S P ++RR RR++ +R RTA
Sbjct: 1167 SRSAPSEADTIRRRMRRREMERLRRTA 1193
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +1
Query: 208 GNKQFHPLEHHVFKTVAQTSGSAEEKQN 291
G HP HH + + + SA+ +N
Sbjct: 192 GTMSMHPQTHHSWAACMELAASADPSRN 219
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 23.0 bits (47), Expect = 8.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 163 VIPGSAATPNGHFRRGNKQFHPLEHH 240
V PG +T NG + HP HH
Sbjct: 481 VSPGMGSTVNGASLTHSHHAHPHHHH 506
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 652 DFNAHHQEWLGSRT 611
DFNA H+ W +RT
Sbjct: 121 DFNAWHEAWGSART 134
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 652 DFNAHHQEWLGSR 614
DFNA H+EW R
Sbjct: 186 DFNAWHEEWGSGR 198
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,840
Number of Sequences: 2352
Number of extensions: 20676
Number of successful extensions: 59
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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