Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060517.seq
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87437-1|BAA13381.2| 1122|Homo sapiens KIAA0250 protein. 34 0.39
BC052565-1|AAH52565.1| 839|Homo sapiens SMG7 protein protein. 34 0.39
BC036381-1|AAH36381.1| 1178|Homo sapiens SMG7 protein protein. 34 0.39
AY386363-1|AAR25620.1| 802|Homo sapiens breast cancer-associate... 34 0.39
AL449223-4|CAI16627.1| 1137|Homo sapiens Smg-7 homolog, nonsense... 34 0.39
AL137800-13|CAI19486.1| 1137|Homo sapiens Smg-7 homolog, nonsens... 34 0.39
AL137800-3|CAI19478.1| 1099|Homo sapiens Smg-7 homolog, nonsense... 34 0.39
AL137800-2|CAI19477.1| 757|Homo sapiens Smg-7 homolog, nonsense... 34 0.39
AK091477-1|BAC03672.1| 757|Homo sapiens protein ( Homo sapiens ... 34 0.39
AK056035-1|BAB71079.1| 799|Homo sapiens protein ( Homo sapiens ... 34 0.39
AB085674-2|BAC53622.1| 1071|Homo sapiens SMG-7 transcript varian... 34 0.39
AB085674-1|BAC53621.1| 1137|Homo sapiens SMG-7 protein. 34 0.39
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 31 3.6
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 31 3.6
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 31 3.6
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 31 3.6
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 31 3.6
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 31 3.6
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 31 3.6
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 31 3.6
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 31 3.6
X91906-1|CAA63000.1| 746|Homo sapiens voltage-gated chloride io... 31 4.7
X51630-1|CAA35956.1| 575|Homo sapiens Krueppel-like zinc-finge... 31 4.7
BC130431-1|AAI30432.1| 746|Homo sapiens CLCN5 protein protein. 31 4.7
BC130429-1|AAI30430.1| 746|Homo sapiens CLCN5 protein protein. 31 4.7
AL663118-1|CAI41555.1| 746|Homo sapiens chloride channel 5 (nep... 31 4.7
CR456443-1|CAG30329.1| 136|Homo sapiens dJ1104E15.4 protein. 30 8.3
BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein. 30 8.3
BC047711-1|AAH47711.1| 136|Homo sapiens ribosomal protein S19 b... 30 8.3
BC037573-1|AAH37573.1| 136|Homo sapiens ribosomal protein S19 b... 30 8.3
AL390726-4|CAH73296.1| 271|Homo sapiens chromosome 9 open readi... 30 8.3
AL022312-5|CAI19179.1| 145|Homo sapiens protein ( (beta-1,4-)-g... 30 8.3
AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction mol... 30 8.3
AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein. 30 8.3
>D87437-1|BAA13381.2| 1122|Homo sapiens KIAA0250 protein.
Length = 1122
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 640 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 699
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 700 HIPYSQQRPSGPGPMNQ 716
>BC052565-1|AAH52565.1| 839|Homo sapiens SMG7 protein protein.
Length = 839
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 357 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 416
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 417 HIPYSQQRPSGPGPMNQ 433
>BC036381-1|AAH36381.1| 1178|Homo sapiens SMG7 protein protein.
Length = 1178
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 609 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 668
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 669 HIPYSQQRPSGPGPMNQ 685
>AY386363-1|AAR25620.1| 802|Homo sapiens breast cancer-associated
antigen SGA-56M protein.
Length = 802
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 320 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 379
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 380 HIPYSQQRPSGPGPMNQ 396
>AL449223-4|CAI16627.1| 1137|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1137
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 655 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 714
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 715 HIPYSQQRPSGPGPMNQ 731
>AL137800-13|CAI19486.1| 1137|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1137
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 655 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 714
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 715 HIPYSQQRPSGPGPMNQ 731
>AL137800-3|CAI19478.1| 1099|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1099
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 567 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 626
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 627 HIPYSQQRPSGPGPMNQ 643
>AL137800-2|CAI19477.1| 757|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 757
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 567 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 626
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 627 HIPYSQQRPSGPGPMNQ 643
>AK091477-1|BAC03672.1| 757|Homo sapiens protein ( Homo sapiens
cDNA FLJ34158 fis, clone FCBBF3013589, weakly similar to
GLUTENIN, LOW MOLECULAR WEIGHT SUBUNIT PRECURSOR. ).
Length = 757
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 567 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 626
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 627 HIPYSQQRPSGPGPMNQ 643
>AK056035-1|BAB71079.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ31473 fis, clone NT2NE2001530. ).
Length = 799
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 609 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 668
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 669 HIPYSQQRPSGPGPMNQ 685
>AB085674-2|BAC53622.1| 1071|Homo sapiens SMG-7 transcript variant 2
protein.
Length = 1071
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 589 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 648
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 649 HIPYSQQRPSGPGPMNQ 665
>AB085674-1|BAC53621.1| 1137|Homo sapiens SMG-7 protein.
Length = 1137
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 61 FPPFP*DVRIPTSPGIIPCHVCGPL-EACSIPAGIVIPGSAATPNGHFRRGNKQFHPLEH 237
FPP P P +IP V + + PAG+ +PG+ P H GN+ +
Sbjct: 655 FPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQS 714
Query: 238 HVFKTVAQTSGSAEEKQ 288
H+ + + SG Q
Sbjct: 715 HIPYSQQRPSGPGPMNQ 731
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 657 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 698
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 625 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 666
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 617 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 658
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 657 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 698
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 617 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 658
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 625 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 666
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 141 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 182
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 630 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 671
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 174 VCCDPQRALQKRE*TIPSPGAPRL*DGRTDVRISRGKAEPPP 299
V C +RA ++R I +PG PR R+ R+ G EPPP
Sbjct: 625 VSCACRRAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPP 666
>X91906-1|CAA63000.1| 746|Homo sapiens voltage-gated chloride ion
channel protein.
Length = 746
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 254 TVLKTWCSRGWNCLFPLLKCPLGVAA 177
TV +WCS+G +C+ P L +G AA
Sbjct: 484 TVFNSWCSQGADCITPGLYAMVGAAA 509
>X51630-1|CAA35956.1| 575|Homo sapiens Krueppel-like zinc-finger
protein protein.
Length = 575
Score = 30.7 bits (66), Expect = 4.7
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -3
Query: 557 PAGDTAHPCPRYRGARASLLDLLLTTDPAGYSVVVDAPLGSSDHCLIRAAVPLSRPDRRT 378
P TA P R A++LD LL DPA V P +S H L L +P+++
Sbjct: 35 PRAGTAAQAPGPRRLLAAILDFLLLQDPASTCV----PEPASQHTLRSGPGCLQQPEQQG 90
Query: 377 TTGYRRVWRYMSA 339
+W + A
Sbjct: 91 VRDPGGIWAKLGA 103
>BC130431-1|AAI30432.1| 746|Homo sapiens CLCN5 protein protein.
Length = 746
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 254 TVLKTWCSRGWNCLFPLLKCPLGVAA 177
TV +WCS+G +C+ P L +G AA
Sbjct: 484 TVFNSWCSQGADCITPGLYAMVGAAA 509
>BC130429-1|AAI30430.1| 746|Homo sapiens CLCN5 protein protein.
Length = 746
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 254 TVLKTWCSRGWNCLFPLLKCPLGVAA 177
TV +WCS+G +C+ P L +G AA
Sbjct: 484 TVFNSWCSQGADCITPGLYAMVGAAA 509
>AL663118-1|CAI41555.1| 746|Homo sapiens chloride channel 5
(nephrolithiasis 2, X-linked, Dent disease) protein.
Length = 746
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 254 TVLKTWCSRGWNCLFPLLKCPLGVAA 177
TV +WCS+G +C+ P L +G AA
Sbjct: 484 TVFNSWCSQGADCITPGLYAMVGAAA 509
>CR456443-1|CAG30329.1| 136|Homo sapiens dJ1104E15.4 protein.
Length = 136
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 275 QRKSRTAPMGRMRKIHAVHPNLLTYTAKLFDTRSSFDDQDERVVRQH 415
Q K R AP+ R RK A+ L +AK +S+ D+ +R R H
Sbjct: 25 QAKPRGAPVKRPRKTKAIQAQKLRNSAKGKVPKSALDEYRKRECRDH 71
>BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein.
Length = 686
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -3
Query: 575 LGLRLLPAGDTAHPCPRY-RGARASLLDLLLTTDPAGYSVVVDAPLGSSDHCLIRAAVPL 399
LGL + A D PR+ RG RA+ + PA + D+P +D C+ +
Sbjct: 91 LGLLVAGAADGCELVPRHLRGRRATGSAATAASSPA--AAAGDSPALMTDPCMSLSPPCF 148
Query: 398 SRPDRRTTTGYRRVWRYMSADWDG 327
+ DR + + + + M D DG
Sbjct: 149 TEEDRFSLEALQTIHKQMDDDKDG 172
>BC047711-1|AAH47711.1| 136|Homo sapiens ribosomal protein S19
binding protein 1 protein.
Length = 136
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 275 QRKSRTAPMGRMRKIHAVHPNLLTYTAKLFDTRSSFDDQDERVVRQH 415
Q K R AP+ R RK A+ L +AK +S+ D+ +R R H
Sbjct: 25 QAKPRGAPVKRPRKTKAIQAQKLRNSAKGKVPKSALDEYRKRECRDH 71
>BC037573-1|AAH37573.1| 136|Homo sapiens ribosomal protein S19
binding protein 1 protein.
Length = 136
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 275 QRKSRTAPMGRMRKIHAVHPNLLTYTAKLFDTRSSFDDQDERVVRQH 415
Q K R AP+ R RK A+ L +AK +S+ D+ +R R H
Sbjct: 25 QAKPRGAPVKRPRKTKAIQAQKLRNSAKGKVPKSALDEYRKRECRDH 71
>AL390726-4|CAH73296.1| 271|Homo sapiens chromosome 9 open reading
frame 51 protein.
Length = 271
Score = 29.9 bits (64), Expect = 8.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 591 LPTISPWPTASPSW*HSPPV 532
+PT PWP +PSW + P V
Sbjct: 34 MPTEGPWPADAPSWMNKPAV 53
>AL022312-5|CAI19179.1| 145|Homo sapiens protein (
(beta-1,4-)-glycoprotein ).).
Length = 145
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 275 QRKSRTAPMGRMRKIHAVHPNLLTYTAKLFDTRSSFDDQDERVVRQH 415
Q K R AP+ R RK A+ L +AK +S+ D+ +R R H
Sbjct: 25 QAKPRGAPVKRPRKTKAIQAQKLRNSAKGKVPKSALDEYRKRECRDH 71
>AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction
molecule 2 protein.
Length = 746
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -3
Query: 575 LGLRLLPAGDTAHPCPRY-RGARASLLDLLLTTDPAGYSVVVDAPLGSSDHCLIRAAVPL 399
LGL + A D PR+ RG RA+ + PA + D+P +D C+ +
Sbjct: 4 LGLLVAGAADGCELVPRHLRGRRATGSAATAASSPA--AAAGDSPALMTDPCMSLSPPCF 61
Query: 398 SRPDRRTTTGYRRVWRYMSADWDG 327
+ DR + + + + M D DG
Sbjct: 62 TEEDRFSLEALQTIHKQMDDDKDG 85
>AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein.
Length = 818
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -3
Query: 575 LGLRLLPAGDTAHPCPRY-RGARASLLDLLLTTDPAGYSVVVDAPLGSSDHCLIRAAVPL 399
LGL + A D PR+ RG RA+ + PA + D+P +D C+ +
Sbjct: 76 LGLLVAGAADGCELVPRHLRGRRATGSAATAASSPA--AAAGDSPALMTDPCMSLSPPCF 133
Query: 398 SRPDRRTTTGYRRVWRYMSADWDG 327
+ DR + + + + M D DG
Sbjct: 134 TEEDRFSLEALQTIHKQMDDDKDG 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,462,431
Number of Sequences: 237096
Number of extensions: 3358708
Number of successful extensions: 8705
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 8049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8697
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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