Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060513.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 481 LYFRVLLRHSXF*NSNLFF*XLYSIFCFSKLMFCIIT 371
           + F VLL  +    + LF   LYS   F+KL+  +++
Sbjct: 51  ILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVS 87


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -1

Query: 71  GYNSTEREFSSVSWQWHRQRN 9
           GY    R+F    W   RQR+
Sbjct: 205 GYEDFRRDFLRTYWSAKRQRD 225


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 647 LRCPNQCSTFLFR 609
           L  P QCST L R
Sbjct: 354 LTAPQQCSTLLLR 366


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 2   DNNFVVDAIAN*HLRILFPYYCIQRNLCIE 91
           D  F+VD +A  H+++    + I    C++
Sbjct: 256 DPVFIVDQVAALHIKLTDTAHMINYAFCVQ 285


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 2   DNNFVVDAIAN*HLRILFPYYCIQRNLCIE 91
           D  F+VD +A  H+++    + I    C++
Sbjct: 256 DPVFIVDQVAALHIKLTDTAHMINYAFCVQ 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,602
Number of Sequences: 336
Number of extensions: 2635
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)