Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060513.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   6.8  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   9.0  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.0  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/55 (23%), Positives = 31/55 (56%)
 Frame = +2

Query: 335 NKMNLQSSNEVTSDDTKHELAEAKNRIQXLEKKIAILEGRMPQKYPEVKFLGYKE 499
           ++M L+ S ++  D  K+  +     ++  ++K+  +EG++ Q   E++  GY+E
Sbjct: 419 SEMELKHSQQLLRDKQKNMNSSDAAYLED-KRKLTKVEGQIGQLERELQSTGYEE 472


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 625 EHWFGHRNFEMVPP 666
           EHW+ H NF  + P
Sbjct: 21  EHWWQHANFYQIYP 34


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/43 (18%), Positives = 22/43 (51%)
 Frame = +2

Query: 212 ISDHHKIEQ*TWADYYKIAEEKRDITFRGFNIFPKDEYNNINK 340
           ++ H ++   TW ++YK   +   I + G+ I     ++ +++
Sbjct: 276 VTVHGEVYHLTWINHYKAIRKAIGIEWPGYMIHESGAWSEVHR 318


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,614
Number of Sequences: 2352
Number of extensions: 8822
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)