Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060513.seq
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051913-1|AAK93337.1|  441|Drosophila melanogaster LD39959p pro...   105   6e-23
AE014296-1387|AAF50474.1|  441|Drosophila melanogaster CG7979-PA...   105   6e-23
AY058582-1|AAL13811.1|  350|Drosophila melanogaster LD27852p pro...    40   0.002
AE014296-117|AAF47398.1|  350|Drosophila melanogaster CG12030-PA...    40   0.002
AY069155-1|AAL39300.1|  302|Drosophila melanogaster GH17516p pro...    33   0.37 
AE013599-1571|AAF58468.2|  302|Drosophila melanogaster CG8768-PA...    33   0.37 
AY069197-1|AAL39342.1|  398|Drosophila melanogaster GH25466p pro...    33   0.48 
AE014296-2875|AAF49369.1|  398|Drosophila melanogaster CG7724-PA...    33   0.48 

>AY051913-1|AAK93337.1|  441|Drosophila melanogaster LD39959p
           protein.
          Length = 441

 Score =  105 bits (252), Expect = 6e-23
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +1

Query: 463 KVP*SKVFRI*RKEKILVTGGAGFVGSHLVDILMMKGHEVIVVDNFFTGRKRNVEHWFGH 642
           K P  K      +++IL+TGGAGFVGSHLVD LM++GHEVIVVDNFFTGRKRNVEHW GH
Sbjct: 103 KYPKVKYLNYKNRKRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGH 162

Query: 643 RNFEMV 660
            NFE++
Sbjct: 163 ENFELI 168



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +2

Query: 377 DTKHELAEAKNRIQXLEKKIAILEGRMPQKYPEVKFLGYKERRR 508
           + K EL   +  +  LE+++  L+   P+KYP+VK+L YK R+R
Sbjct: 74  EQKAELQRTRENLARLEEQVRSLQTSTPRKYPKVKYLNYKNRKR 117


>AE014296-1387|AAF50474.1|  441|Drosophila melanogaster CG7979-PA
           protein.
          Length = 441

 Score =  105 bits (252), Expect = 6e-23
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +1

Query: 463 KVP*SKVFRI*RKEKILVTGGAGFVGSHLVDILMMKGHEVIVVDNFFTGRKRNVEHWFGH 642
           K P  K      +++IL+TGGAGFVGSHLVD LM++GHEVIVVDNFFTGRKRNVEHW GH
Sbjct: 103 KYPKVKYLNYKNRKRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGH 162

Query: 643 RNFEMV 660
            NFE++
Sbjct: 163 ENFELI 168



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +2

Query: 377 DTKHELAEAKNRIQXLEKKIAILEGRMPQKYPEVKFLGYKERRR 508
           + K EL   +  +  LE+++  L+   P+KYP+VK+L YK R+R
Sbjct: 74  EQKAELQRTRENLARLEEQVRSLQTSTPRKYPKVKYLNYKNRKR 117


>AY058582-1|AAL13811.1|  350|Drosophila melanogaster LD27852p
           protein.
          Length = 350

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +1

Query: 508 ILVTGGAGFVGSHLVDILMMKGHEVIVVDN 597
           +LVTGGAG++GSH V  ++  G+ VI VDN
Sbjct: 6   VLVTGGAGYIGSHTVLEMLNAGYNVICVDN 35


>AE014296-117|AAF47398.1|  350|Drosophila melanogaster CG12030-PA
           protein.
          Length = 350

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +1

Query: 508 ILVTGGAGFVGSHLVDILMMKGHEVIVVDN 597
           +LVTGGAG++GSH V  ++  G+ VI VDN
Sbjct: 6   VLVTGGAGYIGSHTVLEMLNAGYNVICVDN 35


>AY069155-1|AAL39300.1|  302|Drosophila melanogaster GH17516p
           protein.
          Length = 302

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 511 LVTGGAGFVGSHLVDILMMKGHEVIVVDNFFTGRKRNVEH 630
           L+ GG GF+G +L + L  KG++V V+     G KR   H
Sbjct: 11  LIGGGTGFIGRNLANHLTKKGYDVTVISR-MPGAKRITWH 49


>AE013599-1571|AAF58468.2|  302|Drosophila melanogaster CG8768-PA
           protein.
          Length = 302

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 511 LVTGGAGFVGSHLVDILMMKGHEVIVVDNFFTGRKRNVEH 630
           L+ GG GF+G +L + L  KG++V V+     G KR   H
Sbjct: 11  LIGGGTGFIGRNLANHLTKKGYDVTVISR-MPGAKRITWH 49


>AY069197-1|AAL39342.1|  398|Drosophila melanogaster GH25466p
           protein.
          Length = 398

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 502 EKILVTGGAGFVGSHLVDILMMKGHEV 582
           E +LVTGG+GF+G HL+  L+ +  E+
Sbjct: 7   EVLLVTGGSGFLGQHLIKQLLERKEEL 33


>AE014296-2875|AAF49369.1|  398|Drosophila melanogaster CG7724-PA
           protein.
          Length = 398

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 502 EKILVTGGAGFVGSHLVDILMMKGHEV 582
           E +LVTGG+GF+G HL+  L+ +  E+
Sbjct: 7   EVLLVTGGSGFLGQHLIKQLLERKEEL 33


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,300,500
Number of Sequences: 53049
Number of extensions: 431071
Number of successful extensions: 1235
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)