Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060512.seq
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           32   0.019
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.41 
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    26   0.95 
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    25   2.2  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   2.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.9  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   3.8  
DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary ...    24   5.1  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    23   8.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.9  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 31.9 bits (69), Expect = 0.019
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 71  MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 184
           +RT   LRGH + +  + W    + L S    G + VW
Sbjct: 54  LRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVW 91


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = -3

Query: 211 VHLVGRVAVPHDQLTILTGRHQVPGIAAPVHGVDLREMTAQGSSGAHLYATD 56
           V   GR +    ++ +L      P  + PV+ +D+ E    G+    L ATD
Sbjct: 489 VESAGRTSTAQIRVVVLDQNDNFPEFSQPVYDIDVPENVIAGTVLLQLQATD 540


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 90  CAVISRRSTPCTGAAIPGTWCRP 158
           CA ++    PCT   I G +C+P
Sbjct: 52  CADLNELQKPCTKQCIQGCFCKP 74


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 325 RASSGYKSSRCCPVHHKRRRSPRGVGAGHHPGRAQRDRV 209
           R  SG  SS+  P HH  ++        HH  + Q+ +V
Sbjct: 13  RPGSGASSSQRSPFHHHHQQQQNHQRMPHHHQQQQQHQV 51


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 561 QACGTCRDCTC 593
           QACGTC   TC
Sbjct: 217 QACGTCNQITC 227



 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 614 CPGKVCFARAVPARPTSLADGVARPGHER 528
           CP K C + AV  + + L   V + G  R
Sbjct: 38  CPQKACISEAVKCQTSCLPGCVCKKGFVR 66


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 331 CPRASSGYKSSRCCPVHHKRRRSPRGVGAGHHPGR 227
           CP+     + +R C   H+  R   G+G  HH  R
Sbjct: 672 CPQDFYANEETRICLPCHQECRGCHGLGDDHHECR 706


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +1

Query: 316 KTREGNVRVSRELPGHSGYLSCCR--FLDDNQ 405
           KT  GN+ +  +  G +G+LSCC   FL+D Q
Sbjct: 521 KTGTGNLLL--KTAGATGHLSCCNSLFLNDLQ 550


>DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary
           secreted peptide withTIL domain protein.
          Length = 99

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 120 CTGAAIPGTWCRP 158
           CTG  + G +CRP
Sbjct: 52  CTGVCVSGCFCRP 64


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -2

Query: 509 HSDMTSPVWPVNCPHCCPVSMSHSAQVMSPELVRIWLSSRK 387
           H+D    ++ +      PVS    A  +S  +VR+W +  K
Sbjct: 470 HTDELPYLFHIPAAMLVPVSPDSHANTVSSRVVRMWTNFAK 510


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 316 SGYKSSRCCPVHHKRRRSPRGVGAGHHP 233
           +GY + + C V H  + SP+ +   H P
Sbjct: 81  TGYSNRKSCDVCHAGQHSPQFLTDFHDP 108


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 110 IYAMHWGSDSRNLVSASQDGKLIVWDSHT 196
           I+ + W S S++LVS + D     WD +T
Sbjct: 15  IFGVFWASLSKSLVSQAPDE--CRWDGYT 41


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = -2

Query: 551  VARPGHERALVRRQHSDMTSPV----WPVNCPHCCPVSMSHSAQVMSPELVRIWLSSRKR 384
            +A P   RA++RR+   +T  V    W  N  +      +  A  + PE V  W++ ++ 
Sbjct: 858  LADPEASRAVIRREERAVTLEVWQREWDANASNPGASRYARWAHRLIPE-VHSWMAQKRG 916

Query: 383  QQD 375
            + D
Sbjct: 917  EVD 919


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,865
Number of Sequences: 2352
Number of extensions: 13335
Number of successful extensions: 44
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)