Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060510.seq
(618 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 90 4e-17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 84 2e-15
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 82 9e-15
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 79 8e-14
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 76 8e-13
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 76 8e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 1e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 75 1e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 75 2e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 73 6e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 71 3e-11
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 70 4e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 62 8e-09
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 62 8e-09
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 62 8e-09
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 62 8e-09
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 62 8e-09
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 61 2e-08
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 61 2e-08
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 61 2e-08
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 60 4e-08
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 60 4e-08
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 60 5e-08
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 60 5e-08
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 57 3e-07
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 55 1e-06
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 54 2e-06
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 54 3e-06
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 54 4e-06
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 51 2e-05
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 50 3e-05
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 50 3e-05
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 49 1e-04
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 49 1e-04
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 49 1e-04
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 49 1e-04
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 49 1e-04
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 48 1e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 48 2e-04
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 47 3e-04
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 47 4e-04
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 46 7e-04
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 43 0.007
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 41 0.021
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.036
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 40 0.047
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 40 0.063
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 40 0.063
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 39 0.083
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 39 0.11
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 38 0.14
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 38 0.25
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 37 0.33
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 37 0.44
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 36 0.77
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 36 0.77
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 36 1.0
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 35 1.8
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 35 1.8
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 34 3.1
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 34 3.1
UniRef50_UPI00005F96D4 Cluster: hypothetical protein YfreA_01002... 33 4.1
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 33 4.1
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 33 4.1
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 33 5.5
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 33 7.2
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 32 9.5
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 89.8 bits (213), Expect = 4e-17
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -1
Query: 267 KGGGWSQNLILXXRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 88
K GG +QNL+L RGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 87 PINDPGFPNSARIKSLKDVPIIP 19
PI PG PNSARIKSL DVP +P
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMP 207
Score = 78.2 bits (184), Expect = 1e-13
Identities = 42/83 (50%), Positives = 48/83 (57%)
Frame = -2
Query: 503 TAHTNXGN*SXXIXFXRXXXIVVIXLXAPIIDEIPAKCSEXIARSTDLPLCAILDESGG* 324
T TN G S I R VV+ AP I+E PAKC+E I STD P CAI SGG
Sbjct: 47 TDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGY 106
Query: 323 TVHPVPAPFSXILLEINNIREGG 255
TVHPVP P S I L + ++EGG
Sbjct: 107 TVHPVPTPLSTIPLNKSKVKEGG 129
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = -3
Query: 616 PPPAGSKNDVFKFRSVNHIVXAPAKTGXDXXHKNAVS 506
PPPAGSK +VFKFRSV IV APA TG + K AVS
Sbjct: 9 PPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVS 45
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/71 (60%), Positives = 47/71 (66%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
AELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR+
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 236 NIRF*LHPPPL 268
N+ F L PP L
Sbjct: 96 NMSFWLLPPSL 106
Score = 79.4 bits (187), Expect = 6e-14
Identities = 43/75 (57%), Positives = 44/75 (58%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
ENGAGTG TVYPPLSSNIAH G SVDLAI SLHL R N S
Sbjct: 116 ENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSF 175
Query: 475 DQLPXFV*AVGIQHF 519
DQ+P FV AVGI F
Sbjct: 176 DQMPLFVWAVGITAF 190
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TAFL LS PVLAGA T+ LTDRNLNTSFFDPAGGG
Sbjct: 188 TAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 223
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 82.2 bits (194), Expect = 9e-15
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+ N
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 239 IRF*LHPPPL 268
+ F L PP L
Sbjct: 73 MSFWLLPPSL 82
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/72 (56%), Positives = 43/72 (59%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
ENGAGTG TVYPPLSSNIAH G SVDLAI SLHL R N S
Sbjct: 92 ENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSF 151
Query: 475 DQLPXFV*AVGI 510
DQ+P F+ AVGI
Sbjct: 152 DQMPLFIWAVGI 163
Score = 59.3 bits (137), Expect = 7e-08
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLAGA T+ LTDRNLNTSFFDPAGGG
Sbjct: 164 TALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGG 199
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 79.0 bits (186), Expect = 8e-14
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
AELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 236 NIRF*LHPP 262
N+ F L PP
Sbjct: 100 NMSFWLXPP 108
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
E GAGTG TVYPPL+ N+AH G SVDLAI SLHL
Sbjct: 120 EAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHL 153
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLA T+ LTDRNLNT+FFDPAGGG
Sbjct: 192 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGG 227
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 75.8 bits (178), Expect = 8e-13
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 236 NIRF*LHPP 262
N+ F L PP
Sbjct: 99 NMSFWLLPP 107
Score = 56.0 bits (129), Expect = 7e-07
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
E GAGTG TVYPPL+ N+AH G SVDL I SLHL
Sbjct: 119 EAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 152
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLA T+ LTDRNLNT+FFDPAGGG
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGG 226
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 75.8 bits (178), Expect = 8e-13
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 236 NIRF*LHPP 262
N+ F L PP
Sbjct: 99 NMSFWLLPP 107
Score = 56.8 bits (131), Expect = 4e-07
Identities = 32/70 (45%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E GAGTG TVYPPL+ N+AH G SVDL I SLHL + S
Sbjct: 119 EAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQ 178
Query: 475 DQLPXFV*AV 504
Q P FV AV
Sbjct: 179 YQTPLFVWAV 188
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLA T+ LTDRNLNT+FFDPAGGG
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGG 226
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
AEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR+
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 236 NIRF*LHPP 262
N+ F L PP
Sbjct: 88 NMSFWLLPP 96
Score = 56.8 bits (131), Expect = 4e-07
Identities = 32/70 (45%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E GAGTG TVYPPL+ N+AH G SVDL I SLHL + S
Sbjct: 108 EAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQ 167
Query: 475 DQLPXFV*AV 504
Q P FV AV
Sbjct: 168 YQTPLFVWAV 177
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDP 605
TA L LS PVLA T+ LTDRNLNT+FFDP
Sbjct: 180 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
AELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 236 NIRF*LHPPPL 268
N+ F L PP L
Sbjct: 99 NMSFWLLPPSL 109
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLA T+ LTDRNLNT+FFDPAGGG
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGG 226
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
E GAGTG TVYPPL+ N +H G SVDL I SLHL
Sbjct: 119 EAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHL 152
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/70 (51%), Positives = 43/70 (61%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+ N
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 239 IRF*LHPPPL 268
+ F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 60.9 bits (141), Expect = 2e-08
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
++L S + TA L LS PVLAGA T+ LTDRN NTSFFDPAGGG
Sbjct: 164 VSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGG 209
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
E+GAGTG TVYPPLS N AH G SVDLAI SLHL
Sbjct: 102 ESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHL 135
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/71 (49%), Positives = 44/71 (61%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+ N
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 239 IRF*LHPPPLY 271
I F L PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
I L S TA L LS PVLAGA T+ LTDR NT+FFDPAGGG
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGG 227
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/70 (42%), Positives = 36/70 (51%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E GAGTG TVYPPL+S AH G SVD+AI SLHL R +
Sbjct: 120 EQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTM 179
Query: 475 DQLPXFV*AV 504
++P FV +V
Sbjct: 180 SRIPLFVWSV 189
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 236 NIRF*LHPP 262
N+ F L PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/72 (47%), Positives = 42/72 (58%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+ N
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 239 IRF*LHPPPLYY 274
+ F P +Y
Sbjct: 84 MSFGFFPLHWHY 95
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+ N
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 239 IRF*LHPPPL 268
+ F L P L
Sbjct: 84 MSFWLLIPSL 93
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
++L S TA L LS PVLAGA T+ LTDRN+NTSFFDP+GGG
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGG 210
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/64 (40%), Positives = 30/64 (46%)
Frame = +1
Query: 301 GAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSXDQ 480
G GTG TVYPPLS + H G SVDL I SLHL R N + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 481 LPXF 492
+ F
Sbjct: 165 MSLF 168
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 62.5 bits (145), Expect = 8e-09
Identities = 36/75 (48%), Positives = 40/75 (53%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E+GAGTG TVYPPLSS AH G SVDLAI SLHL R N S
Sbjct: 120 ESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSM 179
Query: 475 DQLPXFV*AVGIQHF 519
++P FV A+ I F
Sbjct: 180 HKMPLFVWAIFITAF 194
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TAFL LS PVL+ T+ L DRN NTSFF+ AGGG
Sbjct: 192 TAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGG 227
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 233 XNIRF*LHP 259
+I F L P
Sbjct: 99 NSIGFWLLP 107
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 62.5 bits (145), Expect = 8e-09
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 233 XNIRF*LHPPPL 268
NI F L PP L
Sbjct: 98 NNISFWLLPPSL 109
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLAGA T+ LTDRN NTSF+DPAGGG
Sbjct: 191 TAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGG 226
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/70 (44%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E GAGTG TVYPPLS +H G SVDLAI SLHL R +
Sbjct: 119 EQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTL 178
Query: 475 DQLPXFV*AV 504
+LP FV A+
Sbjct: 179 HKLPLFVWAI 188
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 62.5 bits (145), Expect = 8e-09
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 233 XNIRF*LHPPPL 268
NI F L PP L
Sbjct: 98 NNISFWLLPPSL 109
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLAGA T+ LTDRN NTSF+DPAGGG
Sbjct: 191 TAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGG 226
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/70 (44%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E GAGTG TVYPPLS +H G SVDLAI SLHL R +
Sbjct: 119 EQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTL 178
Query: 475 DQLPXFV*AV 504
+LP FV A+
Sbjct: 179 HKLPLFVWAI 188
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 62.5 bits (145), Expect = 8e-09
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 233 XNIRF*LHPPPL 268
NI F L PP L
Sbjct: 98 NNISFWLLPPSL 109
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/70 (44%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E GAGTG TVYPPLS +H G SVDLAI SLHL R +
Sbjct: 119 EQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTL 178
Query: 475 DQLPXFV*AV 504
+LP FV A+
Sbjct: 179 HKLPLFVWAI 188
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 62.5 bits (145), Expect = 8e-09
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 233 XNIRF*LHPPPL 268
NI F L PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
EL PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR+
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 236 NIRF*LHPPPL 268
NI F L PP L
Sbjct: 128 NISFWLLPPSL 138
Score = 41.5 bits (93), Expect = 0.016
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Frame = +1
Query: 295 ENGAGTGXTV----YPPLSSNIAHRGRSVDLAIXSLHL 396
E G GTG T+ YPPLS +H G SVDLAI +LHL
Sbjct: 148 EGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHL 185
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 558 TI*LTDRNLNTSFFDPAGGG 617
T+ LTDRN NTSFF+ AGGG
Sbjct: 233 TMVLTDRNFNTSFFEVAGGG 252
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL P + L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR+
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 233 XNIRF*LHPPPL 268
NI F L PP L
Sbjct: 106 NNISFWLLPPSL 117
Score = 55.6 bits (128), Expect = 9e-07
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
I L S TAFL L+ PVLAGA T+ LTDRN NTSFFD +GGG
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGG 234
Score = 50.0 bits (114), Expect = 4e-05
Identities = 29/75 (38%), Positives = 37/75 (49%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E G GTG TVYPPLSS +H G +VDLAI SLH+ R S
Sbjct: 127 EVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSM 186
Query: 475 DQLPXFV*AVGIQHF 519
++P FV ++ + F
Sbjct: 187 YRIPLFVWSILVTAF 201
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 60.9 bits (141), Expect = 2e-08
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR+
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 233 XNIRF*LHPPPL 268
NI F L PP L
Sbjct: 101 NNISFWLLPPSL 112
Score = 59.3 bits (137), Expect = 7e-08
Identities = 30/46 (65%), Positives = 33/46 (71%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
+ L S TAFL LS PVLAGA T+ LTDRN NT+FFDPAGGG
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGG 229
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E G+GTG TVYPPLS +H G +VDLAI SLHL R +
Sbjct: 122 EVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTM 181
Query: 475 DQLPXFV*AVGIQHF 519
+LP FV +V + F
Sbjct: 182 HRLPLFVWSVLVTAF 196
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 60.1 bits (139), Expect = 4e-08
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR+
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 233 XNIRF*LHPPPL 268
NI F L PP L
Sbjct: 102 NNISFWLLPPSL 113
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 60.1 bits (139), Expect = 4e-08
Identities = 34/72 (47%), Positives = 40/72 (55%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E GAGTG TV PPLS+NIAH G SVDLAI SLH+ R + +
Sbjct: 38 EKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTP 97
Query: 475 DQLPXFV*AVGI 510
++P FV AV I
Sbjct: 98 XRMPLFVWAVEI 109
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLAGA T+ LTDRN+NTSFFDPAGGG
Sbjct: 110 TAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGG 145
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 59.7 bits (138), Expect = 5e-08
Identities = 34/75 (45%), Positives = 40/75 (53%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E+GAGTG TVYPPLSS AH G SVDLAI +LHL R N +
Sbjct: 120 ESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTM 179
Query: 475 DQLPXFV*AVGIQHF 519
+LP FV ++ I F
Sbjct: 180 HKLPLFVWSIFITAF 194
Score = 49.2 bits (112), Expect = 8e-05
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 233 XNIRF*LHP 259
NI F + P
Sbjct: 99 NNIAFWVLP 107
Score = 46.0 bits (104), Expect = 7e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TAFL LS PVL+ T+ L DRN NTSFF+ +GGG
Sbjct: 192 TAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGG 227
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 59.7 bits (138), Expect = 5e-08
Identities = 34/75 (45%), Positives = 40/75 (53%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E+GAGTG TVYPPLSS AH G SVDLAI +LHL R N +
Sbjct: 120 ESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTM 179
Query: 475 DQLPXFV*AVGIQHF 519
+LP FV ++ I F
Sbjct: 180 HKLPLFVWSIFITAF 194
Score = 49.2 bits (112), Expect = 8e-05
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 233 XNIRF*LHP 259
NI F + P
Sbjct: 99 NNIAFWVLP 107
Score = 46.0 bits (104), Expect = 7e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TAFL LS PVL+ T+ L DRN NTSFF+ +GGG
Sbjct: 192 TAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGG 227
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/70 (44%), Positives = 38/70 (54%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E+GAGTG TVYPPL+S AH G SVDLAI +LH+ R N +
Sbjct: 120 ESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTM 179
Query: 475 DQLPXFV*AV 504
+LP FV A+
Sbjct: 180 HKLPLFVWAI 189
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 233 XNIRF*LHP 259
NI F L P
Sbjct: 99 NNIGFWLLP 107
Score = 43.2 bits (97), Expect = 0.005
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L L+ PVL+ T+ L DRN NTSFF+ AGGG
Sbjct: 192 TAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGG 227
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
+ L S TA+L LS PVLAGA T+ LTDRN T+FFDPAGGG
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGG 332
Score = 41.1 bits (92), Expect = 0.021
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 56 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 229
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 230 IXNIRF 247
+ N+ +
Sbjct: 203 LNNLSY 208
Score = 37.5 bits (83), Expect = 0.25
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
+ GAG G T YPP+S+ R+VD AI ++H+
Sbjct: 225 DGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHV 258
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 59 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 236 NIRF*LHPPPLY 271
N+ + L P L+
Sbjct: 126 NVSYWLLIPSLF 137
Score = 49.6 bits (113), Expect = 6e-05
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLA A T+ LTDRNLNTSF++ AGGG
Sbjct: 218 TAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGG 253
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
ENG GTG T+YPPLS +H VDL I LHL
Sbjct: 146 ENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHL 179
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 236 NIRF*LHPPPL 268
NI + L P +
Sbjct: 100 NISYLLLIPSI 110
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
ENG GTG T+YPPLS +H G SVDLAI LHL
Sbjct: 120 ENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHL 153
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TA L LS PVLAG T+ LTDRN NTSFF+ AGGG
Sbjct: 192 TAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGG 227
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXS 387
ENGAGTG TVYPPLSS AH G SVDLAI S
Sbjct: 35 ENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 35.9 bits (79), Expect = 0.77
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 194 LILGAPDIAFPRIXNIRF*LHPPPL 268
L+LGAPD+AFPR+ N+ F + PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/70 (42%), Positives = 37/70 (52%)
Frame = +3
Query: 408 INYRSX*XYYNNXXXXXKXYXX*SITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLN 587
IN+ YY N K + L S T+FL ++ PVLA A T+ L DRN N
Sbjct: 166 INFICTIFYYKNEAMFNK-----DLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFN 220
Query: 588 TSFFDPAGGG 617
TSF+DP GGG
Sbjct: 221 TSFYDPVGGG 230
Score = 50.4 bits (115), Expect = 3e-05
Identities = 29/75 (38%), Positives = 33/75 (44%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
E G GTG TVYPPLSS +H G SVDL I S HL +
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 475 DQLPXFV*AVGIQHF 519
LP FV +V + F
Sbjct: 183 KDLPLFVWSVAVTSF 197
Score = 46.4 bits (105), Expect = 5e-04
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 233 XNIRF*LHP 259
N F L P
Sbjct: 102 NNFSFWLLP 110
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 50.4 bits (115), Expect = 3e-05
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 233 XNIRF*LHPPPL 268
NI F L P L
Sbjct: 104 NNISFWLLVPSL 115
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
E GAGTG TVY PL+ +H G +VDLAI SLHL
Sbjct: 125 EAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHL 158
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +3
Query: 477 SITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
++ L + TA L LS PVLA T+ + DRN NTSFF+ AGGG
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGG 232
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 50.4 bits (115), Expect = 3e-05
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 233 XNIRF*LHPPPL 268
NI F L P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
E G G G TVYPPL+S + H G SVD AI SLHL
Sbjct: 14 EMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHL 47
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
+ G G+G T+YPPL+S +H G S+D+AI +LHL R N
Sbjct: 137 DEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDY 196
Query: 475 DQLPXFV*AV 504
+LP FV +V
Sbjct: 197 SKLPLFVWSV 206
Score = 46.4 bits (105), Expect = 5e-04
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 68 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNIRF 247
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI N+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 248 *LHPPPLYY 274
+ P + +
Sbjct: 121 VVLLPSMLF 129
Score = 41.5 bits (93), Expect = 0.016
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
+ L S TA L L+ PVLA T+ L DRN NTSFF +GGG
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGG 244
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
+ G G+G T+YPPL+S +H G S+D+AI +LHL R N
Sbjct: 137 DEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDY 196
Query: 475 DQLPXFV*AV 504
+LP FV +V
Sbjct: 197 SKLPLFVWSV 206
Score = 46.4 bits (105), Expect = 5e-04
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 68 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNIRF 247
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI N+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 248 *LHPPPLYY 274
+ P + +
Sbjct: 121 VVLLPSMLF 129
Score = 41.5 bits (93), Expect = 0.016
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
+ L S TA L L+ PVLA T+ L DRN NTSFF +GGG
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGG 244
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
+ G G+G T+YPPL+S +H G S+D+AI +LHL R N
Sbjct: 137 DEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDY 196
Query: 475 DQLPXFV*AV 504
+LP FV +V
Sbjct: 197 SKLPLFVWSV 206
Score = 46.4 bits (105), Expect = 5e-04
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 68 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNIRF 247
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI N+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 248 *LHPPPLYY 274
+ P + +
Sbjct: 121 VVLLPSMLF 129
Score = 41.5 bits (93), Expect = 0.016
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
+ L S TA L L+ PVLA T+ L DRN NTSFF +GGG
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGG 244
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSX 474
+ G G+G T+YPPL+S +H G S+D+AI +LHL R N
Sbjct: 137 DEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDY 196
Query: 475 DQLPXFV*AV 504
+LP FV +V
Sbjct: 197 SKLPLFVWSV 206
Score = 46.4 bits (105), Expect = 5e-04
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 68 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNIRF 247
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI N+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 248 *LHPPPLYY 274
+ P + +
Sbjct: 121 VVLLPSMLF 129
Score = 41.5 bits (93), Expect = 0.016
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
+ L S TA L L+ PVLA T+ L DRN NTSFF +GGG
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGG 244
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
TAFL L+ PVLA A T+ LTDRN T+F+D AGGG
Sbjct: 234 TAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGG 269
Score = 42.3 bits (95), Expect = 0.009
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 98 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNIRF*LHPP 262
++N ++TAH N VP+++GAPD+AFPR+ NI F L P
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIP 147
Score = 42.3 bits (95), Expect = 0.009
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = +1
Query: 298 NGAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSXD 477
NGAGTG TVY PLS++ G +VD+AI SLH+ R +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 478 QLPXFV*AVGIQHF 519
++P FV +V + F
Sbjct: 223 KMPLFVWSVLVTAF 236
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 233 XNIRF*LHPPPL 268
NI F L PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
EL +PG + + YN+++T+H N L+PL++GA D+AFPRI
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 239 IRF*LHPP 262
I F L PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 46.8 bits (106), Expect = 4e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 59 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 233 XNIRF 247
+ F
Sbjct: 109 NALSF 113
Score = 42.7 bits (96), Expect = 0.007
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
T+FL LS PVLAG+ L DRN NTSF+D GG
Sbjct: 201 TSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGG 236
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 46.0 bits (104), Expect = 7e-04
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +3
Query: 459 KXYXX*SITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
K + S +L + TA L ++ PVLAG T+ L DRN NTSF+D GGG
Sbjct: 177 KFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGG 229
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 74 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNIRF 247
G L GD Q YN ++T+H N +P++ G PD+ FPR+ N+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSF 105
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 42.7 bits (96), Expect = 0.007
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
T+ L LS PVLA T+ L DRN T+FF+P+GGG
Sbjct: 281 TSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGG 316
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 41.1 bits (92), Expect = 0.021
Identities = 35/115 (30%), Positives = 43/115 (37%)
Frame = +1
Query: 166 WRIWKLXXXXXXXXXXXXXPTXX*YKILTXXXXXXXXXXXXXXENGAGTGXTVYPPLSSN 345
W IWKL P YKILT N + PL+S+
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINK---RNSS--------PLASS 76
Query: 346 IAHRGRSVDLAIXSLHLXXXXXXXXXXXXXXXXXXXRXNXXSXDQLPXFV*AVGI 510
IAH G SVD+AI SLHL R + D++P F+ AV I
Sbjct: 77 IAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.036
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNT 590
I+L+ S TA L LS PVLAGA T+ LTDRN+NT
Sbjct: 165 ISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 39.9 bits (89), Expect = 0.047
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 477 SITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
S++L C S + L LS PVLA T+ LTD++L T F+D GG
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGG 210
Score = 32.7 bits (71), Expect = 7.2
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
+L P L D +YN VT H N L+P PD+ FPR+
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 239 IRF*LHP 259
+ F L P
Sbjct: 95 LSFWLMP 101
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 39.5 bits (88), Expect = 0.063
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL PG I D YN T H N ++PL+LGA D+AFPR+
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRL 127
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 39.5 bits (88), Expect = 0.063
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
EL PG I D YN + T H N L+P+++GA D+AFP++
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 239 IRF 247
+ F
Sbjct: 123 LSF 125
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 39.1 bits (87), Expect = 0.083
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = +2
Query: 62 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNI 241
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 242 RF*LHPPPL 268
F L PP L
Sbjct: 91 SFWLLPPSL 99
Score = 37.9 bits (84), Expect = 0.19
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 301 GAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
G G VYPP SS +AH +VDL I LHL
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHL 142
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 38.7 bits (86), Expect = 0.11
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 71 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
PG + D + YN ++T H N L+PL++GA D+AFPR+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRL 55
Score = 33.5 bits (73), Expect = 4.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 537 PVLAGAXTI*LTDRNLNTSFFDPAGGG 617
P LAGA T+ D+ L T+FF+PA GG
Sbjct: 156 PSLAGAVTMLFLDKYLGTNFFNPAKGG 182
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
EL P ++YN ++T H N L+PL++G D+AFPR+
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 239 IRF*LHPP 262
+ F L PP
Sbjct: 114 VAFWLTPP 121
Score = 37.9 bits (84), Expect = 0.19
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 477 SITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
S+ L C + T+ L LS PVLA A + D TSFF+P GGG
Sbjct: 191 SMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGG 237
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 37.5 bits (83), Expect = 0.25
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 301 GAGTGXTVYPPLSSNIAHRGRSVDLAIXSLHL 396
G G G T+YPPLS++ G +DLA+ SLH+
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHM 154
Score = 37.5 bits (83), Expect = 0.25
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 510 TAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
T+ L S PVLA T+ L DR+ +TSF+ P GGG
Sbjct: 194 TSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGG 229
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
EL +PG + +Y++I+T HA N +PL++ D++ PR+ N
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 239 I 241
+
Sbjct: 102 L 102
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 37.1 bits (82), Expect = 0.33
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 59 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 233 XNIRF*LHP 259
+I F + P
Sbjct: 148 NSIGFWIQP 156
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 36.7 bits (81), Expect = 0.44
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 59 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
EL G I DD +YNT + H N +PL++GA D+AFPR+
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRV 100
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 35.9 bits (79), Expect = 0.77
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
EL P + + D +YN + T H N L+P ++GAPD+AFP++
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 239 IRF*LHP 259
F L P
Sbjct: 123 AAFWLVP 129
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 35.9 bits (79), Expect = 0.77
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXN 238
EL + +YN ++T+H N +PL++ A D+AFPRI
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 239 IRF*LHPP 262
I F L PP
Sbjct: 155 IAFWLLPP 162
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.5 bits (78), Expect = 1.0
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGG 614
I L S T L LS P+LAG T+ L+DRN N FF GG
Sbjct: 14 INLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGG 58
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 34.7 bits (76), Expect = 1.8
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
A+L P + D YN I T H N +VPL +GA D+AFP +
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 236 NIRF 247
N+ F
Sbjct: 139 NLSF 142
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 34.7 bits (76), Expect = 1.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 98 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNIRF*LHP 259
+YN I T H N +P++ G+P++A+PRI +I L P
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQP 111
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 95 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIXNIRF*LHPPPLYY 274
+ Y +VT HA N L+PL++GA D+AFP + + + P ++
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 33.9 bits (74), Expect = 3.1
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 56 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIX 235
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 236 NIRF 247
F
Sbjct: 124 AFGF 127
>UniRef50_UPI00005F96D4 Cluster: hypothetical protein
YfreA_01002968; n=1; Yersinia frederiksenii ATCC
33641|Rep: hypothetical protein YfreA_01002968 -
Yersinia frederiksenii ATCC 33641
Length = 239
Score = 33.5 bits (73), Expect = 4.1
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 206 APDIAFPRIXNIRF*LHPPPLYY*FQEELXKMVQEQDXQFT-PHF-HLISHIEEDP*ILL 379
AP+I+ P I ++RF PL+ F+E L K ++ + P F +I + D +LL
Sbjct: 79 APEISGPAIESMRFIKESSPLWDLFKEVLFKSADQKYVELVHPSFVQIIKQLTSDEALLL 138
Query: 380 FXHYI*QVFHQL*ERXIXLQQ 442
+ + FHQ+ + + LQ+
Sbjct: 139 LKLDV-EPFHQVYTQDLNLQE 158
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 33.5 bits (73), Expect = 4.1
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 509 YSIFMXXIXTXFSWSXXNMINRSKLKYIIF 598
YS + + T WS N IN SKLKYI+F
Sbjct: 89 YSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 33.5 bits (73), Expect = 4.1
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
+L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRV 109
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 33.1 bits (72), Expect = 5.5
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 480 ITLICMSCRDTAFL*XLSXPVLAGAXTI*LTDRNLNTSFFDPAGGG 617
I L S T+FL L+ P + A T + DR + T FF+PA GG
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGG 242
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 32.7 bits (71), Expect = 7.2
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 295 ENGAGTGXTVYPPLSSNIAHRGRSVDLAIXSL 390
E G+GTG T+YPPLS+++++ G +D I L
Sbjct: 127 EIGSGTGWTLYPPLSTSLSNVG--IDFIIFGL 156
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 32.3 bits (70), Expect = 9.5
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 59 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 232
+LG P + +YN + T H N +VPL++GA D+AFPR+
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRL 115
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,578,558
Number of Sequences: 1657284
Number of extensions: 5688925
Number of successful extensions: 8331
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 8029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8298
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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