Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060509.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = -2

Query: 351 SYVLLMVYNSLIVFFFNVHSAIFLFTQLCGCVFIKSGLFSFPKFSNLLFMACTLFFGCDI 172
           +++L  V+  L+V  +  +    LF   C C FI   +F+     +LLF+ C  +F C +
Sbjct: 244 AFILFTVHLLLLVCIYYFYYMHLLF---C-CAFI---IFTM----HLLFLLCIYYFYCAL 292

Query: 171 II 166
           II
Sbjct: 293 II 294



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -2

Query: 321 LIVFFFNVHSAIFLFTQLCGCVFIKSGLFSFPKFSNLLFMACTLFFGCDIIISTL 157
           L +++F V     L      C FI   +F+     +LLF+ C   F C  II T+
Sbjct: 131 LCIYYFVVPLFFLLCIYYFYCAFI---IFTV----HLLFLLCIYHFFCAFIIFTM 178



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/41 (21%), Positives = 23/41 (56%)
 Frame = -1

Query: 286 FSVYTTVWLCVYQERFVLVS*VLEFTLYGLYSVFWLRYHYF 164
           F+V+  + +C+Y   ++ +     F ++ ++ +F L  +YF
Sbjct: 248 FTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/57 (22%), Positives = 24/57 (42%)
 Frame = -2

Query: 321 LIVFFFNVHSAIFLFTQLCGCVFIKSGLFSFPKFSNLLFMACTLFFGCDIIISTLLS 151
           +I+F   + + +  F  L         L+SF  F+ LL    +L     + I  ++S
Sbjct: 45  VIIFHLILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVSLSGNSAVFIMLIIS 101


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/64 (20%), Positives = 28/64 (43%)
 Frame = -2

Query: 336 MVYNSLIVFFFNVHSAIFLFTQLCGCVFIKSGLFSFPKFSNLLFMACTLFFGCDIIISTL 157
           +V  +L   ++ +  A+ +   +  C+   S      K   LLF   +  + C+++ S L
Sbjct: 187 IVKGTLKTAYYLISFALLIMRLISVCLCGASVHSESSKVLPLLFSVSSSSYNCEVLFSFL 246

Query: 156 LSAF 145
           +  F
Sbjct: 247 IDQF 250


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 424 PSDQLCYINSW 392
           P   LCYI SW
Sbjct: 521 PPQVLCYITSW 531


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 189 FFGCDIIISTLLSAF*IFSKSLNDNYTLI 103
           +F   I   TLLS + +F  + N+N +L+
Sbjct: 57  YFSFYITSYTLLSVYSLFRIATNENNSLV 85


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 189 FFGCDIIISTLLSAF*IFSKSLNDNYTLI 103
           +F   I   TLLS + +F  + N+N +L+
Sbjct: 57  YFSFYITSYTLLSVYSLFRIATNENNSLV 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,871
Number of Sequences: 336
Number of extensions: 3257
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)