Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060509.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.3  
AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse t...    25   2.9  
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    25   2.9  
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    25   2.9  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    25   2.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 155 KSVEIMISQPKNRVQAIKSKFENLGNENKPLLINTQPHS 271
           +S E ++  PK   +A+ +   NL  +++  L+NT P S
Sbjct: 649 ESGEPVVENPKQIEEAVMNLITNLQPDSEDKLLNTMPAS 687


>AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 513 RNQIAPKRHGSCNGRSETAN 572
           RN I+P +HG    RS T N
Sbjct: 28  RNYISPNQHGFVPNRSTTTN 47


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 513 RNQIAPKRHGSCNGRSETAN 572
           RN I+P +HG    RS T N
Sbjct: 28  RNYISPNQHGFVPNRSTTTN 47


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 513 RNQIAPKRHGSCNGRSETAN 572
           RN I+P +HG    RS T N
Sbjct: 28  RNYISPNQHGFVPNRSTTTN 47


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 226 RKREQTALDKHTTTQLCKQKNSGVNIEEKH 315
           RKR + A++   T + CKQ+ S   I+ +H
Sbjct: 8   RKRTRQAVNCTATGRRCKQRKSPYTIDFEH 37


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 522 IAPKRHGSCNGRSETAN 572
           I+PK+HG   GRS + N
Sbjct: 575 ISPKQHGFMPGRSTSTN 591


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,764
Number of Sequences: 2352
Number of extensions: 12879
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)