Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060509.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 30 1.3
M77697-5|AAA27893.3| 239|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 29 2.3
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 29 2.3
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 29 2.3
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 29 2.3
U40955-6|AAA81754.1| 539|Caenorhabditis elegans Hypothetical pr... 29 3.1
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 29 3.1
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 28 5.4
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 28 7.1
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 28 7.1
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 28 7.1
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 28 7.1
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 28 7.1
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 7.1
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 7.1
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 28 7.1
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 28 7.1
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 28 7.1
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 28 7.1
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 9.4
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Frame = +1
Query: 118 IVERFRKYLKCAQKCRNNDIAAKKQSTSHKE*IRELRKREQTALDKHTTT----QLCKQK 285
+ ++ K KC KC N D A + S +E + ++ K Q D + T ++ K
Sbjct: 18 VAKKLIKKHKCKAKCENIDDLANRYEVSKQE-VEKVFKIFQLMDDDGSGTISSSEVAKML 76
Query: 286 NS-GVNIEEKHDQAIVNHEKNVGFDSSIGDHEPRPNTSYLYSRADLKAINSDNKTCLSRQ 462
N G+++ K QA++ +V D I E + + S+ L + +D + LS+
Sbjct: 77 NELGIDVSPKVVQAVM-RSSDVSGDGQIDFEE---FLAAVTSKIKLSTVKADVQLMLSKI 132
Query: 463 TSDPGK 480
++P K
Sbjct: 133 DNNPEK 138
>M77697-5|AAA27893.3| 239|Caenorhabditis elegans Hypothetical
protein B0303.8 protein.
Length = 239
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 611 SFFTQLLI*YHCKVCCFRP 555
+FF LLI ++C +CC+RP
Sbjct: 171 AFFVLLLIIFNCILCCYRP 189
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 303 NVHSAIFLFTQL-CGCVFIKSGLFSFPKFSNLLFMACTLFF--GCDIIISTLLSAF*IFS 133
NV S I L QL C C K+G F +LF+ ++ IIS+L SAF I S
Sbjct: 52 NVVSLINLVIQLFCVCFIWKNGYLKLSTFFIILFIHSSIISLRVFVYIISSLASAFIIDS 111
Query: 132 KSLNDNY 112
++L+ Y
Sbjct: 112 RTLSGFY 118
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +1
Query: 184 KKQSTSHKE*IRELRKREQTALDKHTTTQLCKQKNSGVNIEEKHD-----QAIVNHEKNV 348
+K + H+E ++ + KREQ AL K ++ V + ++H+ AI K+
Sbjct: 32 RKHTVEHRERVQSVLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSF 91
Query: 349 GFDSS 363
F SS
Sbjct: 92 AFGSS 96
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +1
Query: 184 KKQSTSHKE*IRELRKREQTALDKHTTTQLCKQKNSGVNIEEKHD-----QAIVNHEKNV 348
+K + H+E ++ + KREQ AL K ++ V + ++H+ AI K+
Sbjct: 32 RKHTVEHRERVQSVLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSF 91
Query: 349 GFDSS 363
F SS
Sbjct: 92 AFGSS 96
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +1
Query: 184 KKQSTSHKE*IRELRKREQTALDKHTTTQLCKQKNSGVNIEEKHD-----QAIVNHEKNV 348
+K + H+E ++ + KREQ AL K ++ V + ++H+ AI K+
Sbjct: 32 RKHTVEHRERVQSVLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSF 91
Query: 349 GFDSS 363
F SS
Sbjct: 92 AFGSS 96
>U40955-6|AAA81754.1| 539|Caenorhabditis elegans Hypothetical
protein F48B9.1 protein.
Length = 539
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +1
Query: 250 DKHTTTQLCKQKNSGVNIEEKHDQAIVNHEKNVGFDSSIGDHEPRPNTSYLYSRADLKAI 429
+K T Q+ K S N+ ++ I+N + ++ + + +P+PNT+ + + +
Sbjct: 426 EKKTNQQMLKGSASSPNMNSQN--LIINRKTT---EADVENDKPKPNTNRTFEVVTVSVV 480
Query: 430 NSD----NKTCLSRQTSDPGKKLHRSHAFR 507
N D K + GK +HRS R
Sbjct: 481 NVDFARKPKKSVYIMAKFDGKDVHRSSKLR 510
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 286 NSGVNIEEKHDQAIVNHEKNVGFDSSIGDHEPRPNTSYLYSRADLKAINSDNKTCLSR 459
NS ++++ +HD V+ + S G + + SY Y R+D + S N ++R
Sbjct: 225 NSPIHVQTEHDGRSVSSRSGSRLNDSPGSRDVYSSHSYSYHRSDSRNRLSPNDVNITR 282
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -1
Query: 313 VFLQCSLRYFSVYTTVWLCV-YQERFVLVS*VLEFTLYGLYSVFWLRYHYF 164
+F +CS ++ ++ VW V +E ++ +S V TL+ + SV WL + YF
Sbjct: 501 IFTRCSRAFWRMWEVVWFRVSNEETYMFLSAV--GTLFMIMSVGWL-FSYF 548
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 185 KNRVQAIKSKFENLGNENKPLLINTQPHSCVNRKIAE 295
K + AI + +L +N+P++I+ QPH CV + +
Sbjct: 549 KTKYVAILQHY-SLWADNQPVIISDQPHGCVGIMVTQ 584
>Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 214 IRE-LRKREQTALDKHTTTQLCKQKNSGVNIEEKHDQAIVNHEKNVGFDSSIGDHEPRPN 390
IRE L +R + L + C Q + I QA+V +VGF+ + G+ P
Sbjct: 60 IREILPERAEGLLTQSVLEMNCLQSALQMAINRSDVQAVVKTGFHVGFEGTFGERHVNPR 119
Query: 391 T 393
T
Sbjct: 120 T 120
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.9 bits (59), Expect = 7.1
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = -2
Query: 312 FFFNVHSAIFLFTQLCGCVFIKSGLFSFPKFSNLLFMACTLFFGCDIIISTLLSAF*IFS 133
FFF V S LF CG F + S K+ N LF T F I IS+++S
Sbjct: 579 FFFFVISWFSLFFA-CGFPF---PIHSILKYFNPLFFPTTSVFRFTISISSIIS------ 628
Query: 132 KSLNDNYTL 106
KS N N TL
Sbjct: 629 KSFNSNSTL 637
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2166 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2215
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2145 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2194
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2201 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2250
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2155 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2204
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2155 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2204
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2166 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2215
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2155 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2204
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2145 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2194
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 98 ILISV*LSLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNENKPLL 250
+L+++ S D EN L+++ M PK V AIK +E + N N +L
Sbjct: 2201 LLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYE-MTNSNHHML 2250
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 119 SLRDFENI*NALKSVEIMISQPKNRVQAIKSKFENLGNEN 238
S DFE + K+VEI + + R++ +K +F + N+N
Sbjct: 210 SKMDFEVMMKYRKTVEIEMKSVEQRIKDLKEQFVGMENDN 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,563,865
Number of Sequences: 27780
Number of extensions: 296901
Number of successful extensions: 951
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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