Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060506.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    25   1.7  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   9.0  

>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = +1

Query: 28  SSIVLYFQSSFNKQCAIIGHCLSSDCVDXXXLRVRKDTC*FIKMXEVLQXGNDTLSEKKK 207
           S +V+Y   +F      +G     D V    +RV KDT  + +  ++++  ND +    K
Sbjct: 218 SPLVVYLMKAFRAHANALGMKQLHDDVSGFFMRVVKDTVEYREREQIVR--NDFMDLLLK 275

Query: 208 KKN 216
            KN
Sbjct: 276 LKN 278


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 43  YFQSSFNKQCAIIGHCLSSDCVD 111
           +F  S+N  C  + HC   D  D
Sbjct: 767 HFLCSYNTHCFALCHCCEFDACD 789


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,429
Number of Sequences: 2352
Number of extensions: 8387
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)