Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060503.seq
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060391-1|AAL25430.1|  301|Drosophila melanogaster LD29815p pro...   130   2e-30
AE014134-3239|AAF53892.2|  301|Drosophila melanogaster CG10954-P...   130   2e-30
BT029620-1|ABL75679.1|  127|Drosophila melanogaster IP17106p pro...    31   1.9  
BT029556-1|ABL75616.1|  127|Drosophila melanogaster IP16806p pro...    31   1.9  

>AY060391-1|AAL25430.1|  301|Drosophila melanogaster LD29815p
           protein.
          Length = 301

 Score =  130 bits (314), Expect = 2e-30
 Identities = 60/82 (73%), Positives = 67/82 (81%)
 Frame = +2

Query: 8   SDARVGDNISYVTFVLFPRHTCAAARDNTIDLLHMFRDYLHYHIKCSKVYVXSRMRAKAG 187
           +DARVGDNI YVTFVLFPRHT    RDNTI+L+HMFRDYLHYHIKCSK Y+ SRMRAK  
Sbjct: 212 TDARVGDNIGYVTFVLFPRHTNKETRDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTS 271

Query: 188 DLLKVLNRARPHAAARXSERKT 253
           D LKVLNRARP    + +E+KT
Sbjct: 272 DFLKVLNRARPE--PKNTEKKT 291


>AE014134-3239|AAF53892.2|  301|Drosophila melanogaster CG10954-PA
           protein.
          Length = 301

 Score =  130 bits (314), Expect = 2e-30
 Identities = 60/82 (73%), Positives = 67/82 (81%)
 Frame = +2

Query: 8   SDARVGDNISYVTFVLFPRHTCAAARDNTIDLLHMFRDYLHYHIKCSKVYVXSRMRAKAG 187
           +DARVGDNI YVTFVLFPRHT    RDNTI+L+HMFRDYLHYHIKCSK Y+ SRMRAK  
Sbjct: 212 TDARVGDNIGYVTFVLFPRHTNKETRDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTS 271

Query: 188 DLLKVLNRARPHAAARXSERKT 253
           D LKVLNRARP    + +E+KT
Sbjct: 272 DFLKVLNRARPE--PKNTEKKT 291


>BT029620-1|ABL75679.1|  127|Drosophila melanogaster IP17106p
           protein.
          Length = 127

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 137 CGSAGSRGTCAAGRWCCRAPPRTCAAGT 54
           CG  G  G+C  G  CCR     C  G+
Sbjct: 22  CGGGGCCGSCCVGGSCCRGGTGGCCGGS 49


>BT029556-1|ABL75616.1|  127|Drosophila melanogaster IP16806p
           protein.
          Length = 127

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 137 CGSAGSRGTCAAGRWCCRAPPRTCAAGT 54
           CG  G  G+C  G  CCR     C  G+
Sbjct: 22  CGGGGCCGSCCVGGSCCRGGTGGCCGGS 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,009,896
Number of Sequences: 53049
Number of extensions: 440034
Number of successful extensions: 1434
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)