Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060502.seq
(684 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 23 1.8
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 23 1.8
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 3.1
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 3.1
AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan oxyge... 22 5.4
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 22 5.4
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 22 5.4
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 21 9.4
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 9.4
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 9.4
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 9.4
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 442 EFHASKFIC--KCVEEVEGL-VIEHSLKEWRRTR 350
EFH SK++C + ++ + L + E +K W + R
Sbjct: 103 EFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNR 136
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 442 EFHASKFIC--KCVEEVEGL-VIEHSLKEWRRTR 350
EFH SK++C + ++ + L + E +K W + R
Sbjct: 123 EFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNR 156
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 22.6 bits (46), Expect = 3.1
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 287 ATTRSRSGVIFTGNHRLFQSRPG---TAPLFEAMLNDQPFNFLNTFANE 424
A+ ++ S + H+ + S AP E + FNFL+ AN+
Sbjct: 467 ASVQTESSDNYNSFHQFYSSESSQNQVAPTGENSNSSSDFNFLSNLAND 515
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 22.6 bits (46), Expect = 3.1
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 287 ATTRSRSGVIFTGNHRLFQSRPG---TAPLFEAMLNDQPFNFLNTFANE 424
A+ ++ S + H+ + S AP E + FNFL+ AN+
Sbjct: 415 ASVQTESSDNYNSFHQFYSSESSQNQVAPTGENSNSSSDFNFLSNLAND 463
>AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan
oxygenase protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 205 LKVQLSRLLPKSSSTPIGFCPRFCYSRRHNSF 300
LKV + +++ + TP+ F CY R + F
Sbjct: 42 LKVLVDQVMILETMTPLDFMDFRCYLRPASGF 73
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 205 LKVQLSRLLPKSSSTPIGFCPRFCYSRRHNSF 300
LKV + +++ + TP+ F CY R + F
Sbjct: 102 LKVLVDQVMILETMTPLDFMDFRCYLRPASGF 133
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 205 LKVQLSRLLPKSSSTPIGFCPRFCYSRRHNSF 300
LKV + +++ + TP+ F CY R + F
Sbjct: 102 LKVLVDQVMILETMTPLDFMDFRCYLRPASGF 133
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = -1
Query: 627 YVRGVISQVVVWPDVERG 574
Y G + + W D+E+G
Sbjct: 64 YPNGTLQMIDEWGDIEKG 81
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 179 PSSAHFLLLSRF 214
P SAHF +SRF
Sbjct: 68 PISAHFSFMSRF 79
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 179 PSSAHFLLLSRF 214
P SAHF +SRF
Sbjct: 24 PISAHFSFMSRF 35
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 169 PVQAIERSLFAPLKVQLSRLLPKSSSTP 252
P+ A FA S L PK++S+P
Sbjct: 280 PIGASHLPYFAAAVAAASNLSPKTNSSP 307
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,136
Number of Sequences: 336
Number of extensions: 3777
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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