Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060502.seq
(684 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein. 35 0.090
BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p pro... 35 0.090
AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA... 35 0.090
EF599121-1|ABQ96885.1| 793|Drosophila melanogaster Crk-associat... 30 3.4
BT030416-1|ABO52836.1| 831|Drosophila melanogaster IP17195p pro... 30 3.4
AY058273-1|AAL13502.1| 568|Drosophila melanogaster GH02705p pro... 30 3.4
AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA... 30 3.4
AE014296-18|AAF47336.1| 568|Drosophila melanogaster CG1212-PB, ... 30 3.4
AE014296-17|AAF47335.2| 793|Drosophila melanogaster CG1212-PA, ... 30 3.4
AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop prote... 29 7.8
AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA... 29 7.8
AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-P... 29 7.8
>EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p
protein.
Length = 1883
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 229 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 288
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 289 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 325
>AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA
protein.
Length = 1905
Score = 35.1 bits (77), Expect = 0.090
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 221 PGSCPNLRRLQLASVHVSATLVATTRSRSGVIFTGNHRLFQSRPGTAPLFEAMLNDQP-F 397
P + PN+RRL L S +A L A T S S ++ G + R L+ + +P +
Sbjct: 251 PVNLPNMRRLPLLSSTPAAPLAAATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAY 310
Query: 398 NFLNTFANELGGMELITSPIKERKTILRGGSYDFSAY 508
NF G + I+ I GGS ++Y
Sbjct: 311 NFFTGNEAAEGSTGDLPHSIRRSLNIPFGGSSTATSY 347
>EF599121-1|ABQ96885.1| 793|Drosophila melanogaster Crk-associated
substrate protein.
Length = 793
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 519 LVAS*AEKS*DPPRRMVFRS-LIGDVMSSMPPSSFANVLRKLKGWSLSIASKS 364
+ AS AE+S D PR ++ S + MS M PSS A+ L SLS +S +
Sbjct: 286 VAASIAEESYDVPRPLILGSNQLQQQMSQMTPSSSASSLLTSDSLSLSFSSSN 338
>BT030416-1|ABO52836.1| 831|Drosophila melanogaster IP17195p
protein.
Length = 831
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 519 LVAS*AEKS*DPPRRMVFRS-LIGDVMSSMPPSSFANVLRKLKGWSLSIASKS 364
+ AS AE+S D PR ++ S + MS M PSS A+ L SLS +S +
Sbjct: 324 VAASIAEESYDVPRPLILGSNQLQQQMSQMTPSSSASSLLTSDSLSLSFSSSN 376
>AY058273-1|AAL13502.1| 568|Drosophila melanogaster GH02705p
protein.
Length = 568
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 519 LVAS*AEKS*DPPRRMVFRS-LIGDVMSSMPPSSFANVLRKLKGWSLSIASKS 364
+ AS AE+S D PR ++ S + MS M PSS A+ L SLS +S +
Sbjct: 61 VAASIAEESYDVPRPLILGSNQLQQQMSQMTPSSSASSLLTSDSLSLSFSSSN 113
>AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA
protein.
Length = 2272
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 413 FANELGGMELITSPIKERKTILRGGSYDFSAYEATKKDITG*PILNSIQLIPGAPRS 583
FA M+ ++ I K+++ GG Y+F + EA ++ TG P S Q + + RS
Sbjct: 233 FAQGPLSMDTLSLVINNAKSVIHGGLYEFLS-EAKRRTSTGQPSRRSTQGLAPSKRS 288
>AE014296-18|AAF47336.1| 568|Drosophila melanogaster CG1212-PB,
isoform B protein.
Length = 568
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 519 LVAS*AEKS*DPPRRMVFRS-LIGDVMSSMPPSSFANVLRKLKGWSLSIASKS 364
+ AS AE+S D PR ++ S + MS M PSS A+ L SLS +S +
Sbjct: 61 VAASIAEESYDVPRPLILGSNQLQQQMSQMTPSSSASSLLTSDSLSLSFSSSN 113
>AE014296-17|AAF47335.2| 793|Drosophila melanogaster CG1212-PA,
isoform A protein.
Length = 793
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 519 LVAS*AEKS*DPPRRMVFRS-LIGDVMSSMPPSSFANVLRKLKGWSLSIASKS 364
+ AS AE+S D PR ++ S + MS M PSS A+ L SLS +S +
Sbjct: 286 VAASIAEESYDVPRPLILGSNQLQQQMSQMTPSSSASSLLTSDSLSLSFSSSN 338
>AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop protein
protein.
Length = 1023
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -1
Query: 501 EKS*DPPRRMVFRSLIGDVMSSMPPSSFANVLRKLKGWSLSIASKSGAV 355
++S PP R + RS+ D S +PP S+ + + + ++A+K+G +
Sbjct: 197 QESVSPPARKIPRSISADYKSPLPPGSW---MPPINPYLAAVAAKTGGL 242
>AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA
protein.
Length = 892
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +3
Query: 324 ETIDCSNQGLVRRHSLRLCSMTNPSTSSTHLQMNLEAWNSLHHRSKNERPFFVAGLMTFQ 503
+ +D +N+G+ + S +++ +S + + E + ++ ++N PF+ LM
Sbjct: 780 DLLDRTNRGIEEKESWANEYLSSFKVASYATKEDHEEHDDYNNDAENTDPFYWENLMGKS 839
Query: 504 PTKLPKKTSPDDQ 542
KLPKK Q
Sbjct: 840 QPKLPKKQKKQSQ 852
>AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-PA
protein.
Length = 1024
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -1
Query: 501 EKS*DPPRRMVFRSLIGDVMSSMPPSSFANVLRKLKGWSLSIASKSGAV 355
++S PP R + RS+ D S +PP S+ + + + ++A+K+G +
Sbjct: 198 QESVSPPARKIPRSISADYKSPLPPGSW---MPPINPYLAAVAAKTGGL 243
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,970,898
Number of Sequences: 53049
Number of extensions: 703958
Number of successful extensions: 2045
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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