Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060501.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.1  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.1  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.4  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 268 DIHTPDELAGLTPEQADQLRAEWSRELARVEDEIATLRTVL 390
           DI+T +ELA  T     +++  +S   AR+  +I +  T L
Sbjct: 246 DIYTREELAQRTKLTEARIQVWFSNRRARLRKQITSAATPL 286


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -3

Query: 128 FYVCSTLISQALLVKIVTNIELW 60
           +++C+T+IS  +   ++  +E+W
Sbjct: 158 YHICNTVISATVCFMMLLMLEIW 180


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -3

Query: 128 FYVCSTLISQALLVKIVTNIELW 60
           +++C+T+IS  +   ++  +E+W
Sbjct: 154 YHICNTVISATVCFMMLLMLEIW 176


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 19   RLKIVLYQNFIPTYHNSILVTIFTKSAWLISVLHT*KFCVLL 144
            R+K+V+    I      I   IFT+  W+ S++H  K    L
Sbjct: 1149 RIKLVIKAIIIMILSGCI---IFTEGIWICSLIHRKKIVKFL 1187


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 568 QKTESVIKTTAEKTSSIHRRHH 633
           Q+ E   K   +  SSIH+ HH
Sbjct: 88  QQQEKQQKIEQQTHSSIHQHHH 109


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 568 QKTESVIKTTAEKTSSIHRRHH 633
           Q+ E   K   +  SSIH+ HH
Sbjct: 239 QQQEKQQKIEQQTHSSIHQHHH 260


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 568 QKTESVIKTTAEKTSSIHRRHH 633
           Q+ E   K   +  SSIH+ HH
Sbjct: 298 QQQEKQQKIEQQTHSSIHQHHH 319


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 583 QIQFFGIWVFRSRPFVRAATRFSID 509
           ++Q F   V  +RP  +AA  FSID
Sbjct: 203 EVQIFIDVVQHNRPEFKAARFFSID 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,463
Number of Sequences: 336
Number of extensions: 3395
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)