Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060501.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68105-1|CAA92122.2| 195|Caenorhabditis elegans Hypothetical pr... 58 4e-09
AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical ... 31 0.58
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z47358-10|CAA87438.1| 507|Caenorhabditis elegans Hypothetical p... 30 1.8
Z47356-9|CAA87420.1| 507|Caenorhabditis elegans Hypothetical pr... 30 1.8
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 1.8
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 1.8
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 1.8
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 1.8
U97552-2|AAB52862.1| 141|Caenorhabditis elegans Human sedl (spo... 29 4.1
U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase... 29 4.1
AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinas... 29 4.1
AC024772-5|AAF60539.1| 407|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical ... 28 5.4
Z68303-6|CAD89754.1| 708|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68303-5|CAA92639.2| 706|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical ... 28 7.1
>Z68105-1|CAA92122.2| 195|Caenorhabditis elegans Hypothetical
protein F13E6.1 protein.
Length = 195
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/57 (40%), Positives = 43/57 (75%)
Frame = +1
Query: 343 ELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYHR 513
EL + E+EI+TL+ VL ++ + +++LKRKLG+T + E+++D+N+ LK V ++ Y +
Sbjct: 67 ELDKTEEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDTDAYQK 123
>AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical
protein H04D03.4 protein.
Length = 688
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = -3
Query: 272 MSPATPCLTLLLQLFEHRSYFTMKNSYGVK*MKNIKLIFL*KSNRTQNFYVCSTLISQAL 93
+ A CL+ L L HR Y MK S +K I+ FL SNR+ + C L+SQ
Sbjct: 313 LDSALDCLSYYLDL--HRGYH-MKKS-----LKRIET-FLSVSNRSYDLIKCLKLVSQVT 363
Query: 92 LVKIVTNIE 66
++ V N++
Sbjct: 364 MISKVNNVQ 372
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/65 (21%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 316 DQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK---LGITVWKEITEDVNQGLKN 486
++ + + + L++V D + L+ + ++ ++ K+K I WKE+++ V + +++
Sbjct: 59 EETQKKLNETLSKVSDAVKQRADELEKEKQEKAEAKKKEAEAAIEKWKEVSQQVGEFVES 118
Query: 487 VKESQ 501
VKE +
Sbjct: 119 VKEKK 123
>Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical
protein F13B12.4 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 517 RIAWLLLQMAVTETPIYQKTESVIKTTAEKTSS 615
R AW LL A+TE + KT +V +T+ T S
Sbjct: 91 RFAWALLLWAITEGKVTSKTSAVYDSTSGNTGS 123
>Z47358-10|CAA87438.1| 507|Caenorhabditis elegans Hypothetical
protein ZK1307.8 protein.
Length = 507
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 250 RHGVAG--DIHTPDELAGLTPEQADQLR--AEWSRELARVEDEIATLRTVLQSKIRQSSD 417
RH G DI PDE P+ +++ E +RE R+ DE+ T L +KIR++ D
Sbjct: 320 RHDAEGSEDIAHPDEDDEKMPDYPPEVQQLTEKAREARRLFDEVNTKVQDLDAKIREAED 379
>Z47356-9|CAA87420.1| 507|Caenorhabditis elegans Hypothetical
protein ZK1307.8 protein.
Length = 507
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 250 RHGVAG--DIHTPDELAGLTPEQADQLR--AEWSRELARVEDEIATLRTVLQSKIRQSSD 417
RH G DI PDE P+ +++ E +RE R+ DE+ T L +KIR++ D
Sbjct: 320 RHDAEGSEDIAHPDEDDEKMPDYPPEVQQLTEKAREARRLFDEVNTKVQDLDAKIREAED 379
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK 429
EQ D RAEWS E R+E T LQ ++++ D+ ++
Sbjct: 867 EQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK 429
EQ D RAEWS E R+E T LQ ++++ D+ ++
Sbjct: 867 EQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK 429
EQ D RAEWS E R+E T LQ ++++ D+ ++
Sbjct: 627 EQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 667
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK 429
EQ D RAEWS E R+E T LQ ++++ D+ ++
Sbjct: 867 EQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
>U97552-2|AAB52862.1| 141|Caenorhabditis elegans Human sedl
(spondyloepiphysealdysplasia tarda) related protein 1
protein.
Length = 141
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 664 HLTELAGHAGRDAADESKTSSRRSFLSQIQFFGIW 560
HL GHA D DE ++ + +L + F W
Sbjct: 38 HLNHYIGHAALDIVDEHALTTSQMYLKMVDKFNEW 72
>U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase c
protein 3 protein.
Length = 597
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 463 DVNQGLKNVKESQVYHR*RIAWLLLQMAVTETPIYQKTES 582
D+N+GL+++KE Q + R I W L+ P + ES
Sbjct: 508 DINEGLRDMKEHQ-FFRGFIDWEALEQKAVAPPYHPAVES 546
>AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinase
C3 protein.
Length = 597
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 463 DVNQGLKNVKESQVYHR*RIAWLLLQMAVTETPIYQKTES 582
D+N+GL+++KE Q + R I W L+ P + ES
Sbjct: 508 DINEGLRDMKEHQ-FFRGFIDWEALEQKAVAPPYHPAVES 546
>AC024772-5|AAF60539.1| 407|Caenorhabditis elegans Hypothetical
protein Y40C5A.4a protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 50 YLPTITRYWSQFSLKVLGLLVCYI---HKSFVFYYFS 151
Y P I W + V+GL+V I H S +FY FS
Sbjct: 22 YSPPIFLEWKMVFVGVIGLIVALISIVHNSLLFYTFS 58
>AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical
protein Y40C5A.4b protein.
Length = 441
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 50 YLPTITRYWSQFSLKVLGLLVCYI---HKSFVFYYFS 151
Y P I W + V+GL+V I H S +FY FS
Sbjct: 22 YSPPIFLEWKMVFVGVIGLIVALISIVHNSLLFYTFS 58
>Z68303-6|CAD89754.1| 708|Caenorhabditis elegans Hypothetical
protein ZK809.5b protein.
Length = 708
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Frame = +1
Query: 298 LTPEQADQLRAEWSRELARVEDEIATLR-----TVLQSKIRQSSDLKRKLGITVWKEIT- 459
L E ++ R EW R++ +E+ R L+S ++ SD+ + I++WK+ T
Sbjct: 188 LNKENFEKCRDEWQRKMELEMEELRLERERIEVASLKSTDKRRSDMAIEAEISMWKKRTA 247
Query: 460 ---EDVNQGLKNVKE 495
D N+ K V E
Sbjct: 248 ELEHDANETRKRVGE 262
>Z68303-5|CAA92639.2| 706|Caenorhabditis elegans Hypothetical
protein ZK809.5a protein.
Length = 706
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Frame = +1
Query: 298 LTPEQADQLRAEWSRELARVEDEIATLR-----TVLQSKIRQSSDLKRKLGITVWKEIT- 459
L E ++ R EW R++ +E+ R L+S ++ SD+ + I++WK+ T
Sbjct: 186 LNKENFEKCRDEWQRKMELEMEELRLERERIEVASLKSTDKRRSDMAIEAEISMWKKRTA 245
Query: 460 ---EDVNQGLKNVKE 495
D N+ K V E
Sbjct: 246 ELEHDANETRKRVGE 260
>AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical
protein Y39E4B.2 protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 403 RQSSDLKRKLGITVWKEITEDVNQGLKNVKES 498
++ S LK KLGIT W ++ + + + K +K S
Sbjct: 204 KEYSRLKMKLGITSWMKLKDPIEELKKIIKTS 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,092,946
Number of Sequences: 27780
Number of extensions: 316217
Number of successful extensions: 823
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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