Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060500.seq
(503 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 58 1e-09
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 54 2e-08
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 52 5e-08
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 50 2e-07
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 47 1e-06
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 47 1e-06
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 47 2e-06
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 46 4e-06
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 40 3e-04
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 40 3e-04
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 38 6e-04
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 38 9e-04
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 38 9e-04
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 37 0.002
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.056
SPCC24B10.13 |skb5||Shk1 kinase binding protein 5|Schizosaccharo... 29 0.30
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.30
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 29 0.40
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 28 0.69
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 28 0.92
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.6
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 26 2.8
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 26 3.7
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 26 3.7
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 25 6.5
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 6.5
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 25 8.5
SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 8.5
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 57.6 bits (133), Expect = 1e-09
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 310 QALYDFTPQEAXELEFRRGDVITVTDRSDQH--WWQGXIAHRRGLFPAXYV 456
+A+Y F ++ +L F++GD+I + +RS H WW G I +R G+FPA YV
Sbjct: 377 RAMYSFAGEQPGDLSFQKGDIIDIVERSGSHDDWWTGRIGYREGIFPANYV 427
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 53.6 bits (123), Expect = 2e-08
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAHRRGLFPAXYV 456
V+ALYDF E EL F++GD+I V + + WW+G + G+FP YV
Sbjct: 220 VRALYDFAATEQGELSFKKGDIILVLESVYKDWWKGSCKNAVGIFPVNYV 269
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 52.0 bits (119), Expect = 5e-08
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAHRRGLFPAXYV 456
V+A+YD+ QE EL F ++I D D +WW+G RGLFP+ YV
Sbjct: 805 VKAIYDYQAQEDNELSFFEDEIIANVDCVDPNWWEGECHGHRGLFPSNYV 854
Score = 42.3 bits (95), Expect = 4e-05
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 316 LYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAH-RRGLFPAXYVTV 462
+YD++P+E E+E + I + + D WW G + ++GLFP+ YV +
Sbjct: 733 IYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSNYVEI 782
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 50.4 bits (115), Expect = 2e-07
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAHRRGLFPAXYV 456
V A+YDF +A +L F G+VI V + + WW+G + + G+FP+ YV
Sbjct: 145 VLAMYDFPGPDAGDLGFHAGEVIIVLEHVNNDWWRGELNGKEGIFPSNYV 194
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 47.2 bits (107), Expect = 1e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 292 PIEMLVQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAH----RRGLFPAXYV 456
PI V ALYD+ Q E+ F++GD + V + WW G I + +RGLFP+ +V
Sbjct: 866 PILGYVIALYDYQAQIPEEISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPSNFV 924
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 47.2 bits (107), Expect = 1e-06
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSD--QHWWQGXIAHRRGLFPAXYV 456
V ALYD+ Q A +L F GD I V R+D WW G + +G FP YV
Sbjct: 412 VVALYDYAAQAAGDLSFHAGDRIEVVSRTDNQNEWWIGRLNGAQGQFPGNYV 463
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 46.8 bits (106), Expect = 2e-06
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIA----HRRGLFPAXYV 456
V ALYD+ E+ FR+GD I V + WW+G + H RG FP+ +V
Sbjct: 612 VSALYDYDAAIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFV 665
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 45.6 bits (103), Expect = 4e-06
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSDQHWW-QGXIAHRRGLFPAXYVT 459
V+ALY +T Q EL + GD+I VT+R+ + W +G + G FPA YVT
Sbjct: 589 VKALYAYTAQSDMELSIQEGDIIQVTNRNAGNGWSEGILNGVTGQFPANYVT 640
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 39.5 bits (88), Expect = 3e-04
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 283 DVVPIEMLVQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAH----RRGLFPAX 450
D PI V+ALY + E++ D + V +R WW+G + R GLFP+
Sbjct: 349 DGFPIFAYVRALYAYKATLPSEIDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSN 408
Query: 451 YV 456
Y+
Sbjct: 409 YI 410
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 39.5 bits (88), Expect = 3e-04
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = +1
Query: 304 LVQALYDFTPQEAXELEFRRGDVITVTDRSDQHWW-------QGXIAHRRGLFPAXYVTV 462
+V+ Y F P+ EL+ ++GD++ V D+ WW G G+FP+ Y
Sbjct: 425 VVRMKYSFEPETENELKLKKGDLLLVLKEIDEGWWVGEKLGEDGVFTGNTGMFPSNYCVP 484
Query: 463 XH 468
H
Sbjct: 485 AH 486
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 38.3 bits (85), Expect = 6e-04
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 286 VVPIEMLVQALYDFTPQEAXELEFRRGDVITVTDR-SDQHWWQ--GXIAHRRGLFPAXY 453
+ P +++ALYD+T ++A E+ F +GD V R +D+ W++ A RG P +
Sbjct: 22 IEPPRKVIRALYDYTARKATEVSFAKGDFFHVIGRENDKAWYEVCNPAAGTRGFVPVSH 80
Score = 28.3 bits (60), Expect = 0.69
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 292 PIEMLVQALYDFTPQEAXELEFRRGDVITVTDRSDQHW 405
P+ +VQ +DF + ELE + G+ I + RS+ W
Sbjct: 125 PLFGIVQ--FDFAAERPDELEAKAGEAIIIIARSNHEW 160
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 37.9 bits (84), Expect = 9e-04
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 304 LVQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAHRRGLFPAXYVT 459
L ALYDF + E+ ++ ++I + + WW G PA YVT
Sbjct: 1110 LYLALYDFAGRSPNEMTIKKDEIIEIVQKEPSGWWLALKNGAEGWVPATYVT 1161
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 37.9 bits (84), Expect = 9e-04
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +1
Query: 301 MLVQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAHRR-------GLFPAXYVT 459
+ V+A+Y FT + EL+ GDVI V+++ W+ G + + G+FP Y T
Sbjct: 282 VFVKAIYSFTGRNEKELDLHTGDVIQVSEQLGPDWYMGEKVNSKAEKLGNSGMFPVNYCT 341
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 304 LVQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQG--XIAHRRGLFPAXYV 456
+V+ALY + + +L+F GD+I D WW G + +G+FP+ +V
Sbjct: 10 MVRALYAWPGEREGDLKFTEGDLIECLSIGDGKWWIGRHINTNTQGIFPSNFV 62
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.9 bits (69), Expect = 0.056
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAHRRGLFPAXYV 456
++ALYD+T Q E+ F+ + +D W + GL P YV
Sbjct: 85 MKALYDYTQQSVDEISFQADQTLDCYGDTDSDWILVGFNNNFGLAPRNYV 134
>SPCC24B10.13 |skb5||Shk1 kinase binding protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 140
Score = 29.5 bits (63), Expect = 0.30
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 313 ALYDFTPQEAXELEFRRGDVITVTDRSDQHWW--QGXIAHRRGLFPAXYV 456
ALYDF P EL F G + + S W + R GL P +V
Sbjct: 87 ALYDFEPLHDNELGFTTGQRLCILSESSDGWLIAYDDASGRSGLVPETFV 136
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.30
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQG 414
V ALY + + +LEF G VI V D W+ G
Sbjct: 8 VVALYPYRSSFSDDLEFDPGQVIDVVSNLDGDWYTG 43
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 29.1 bits (62), Expect = 0.40
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 349 LEFRRGDVITVTDRSDQHWWQGXIAHRRGLFP 444
L+F GD I V + + W G + +RG FP
Sbjct: 20 LKFSAGDTIIVIEVLEDGWCDGICSEKRGWFP 51
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 28.3 bits (60), Expect = 0.69
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 307 VQALYDFTPQEAXELEFRRGDVITVTDRSDQHWWQGXIAHRR--GLFPAXYV 456
V A+ F +++ +GD++ + D S+ +WW + G PA Y+
Sbjct: 123 VHAIRGFEATVEGQVDATKGDMMILLDDSNSYWWLVKMCKNLAIGYLPAEYI 174
>SPBC16H5.11c |skb1|rmt5|type II protein arginine
N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 645
Score = 27.9 bits (59), Expect = 0.92
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 RHEHSWYYGRITRADAEKLLANKPEGGFLIRISE--SSPGDFSLSVKCPDGVQH 156
R+ W G++T + N P+ I +SE S GD LS +C DGVQH
Sbjct: 391 RNRQDWA-GKVTLVFGDMRTWN-PDYKIDILVSELLGSMGDNELSPECLDGVQH 442
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 1.6
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -1
Query: 314 ACTNISMGTTSRSLSA*RRLQTRYDDNXASSLSELNLTTQRKNLLEASLNTLKCWTPSGH 135
A TN + TT++ A + R D + ASS S+ T K+ ++S + T SGH
Sbjct: 568 ASTNAAATTTTKKPKAAKSTAVRDDVSSASSDSDKGTTGLGKSESKSSRKERRSSTSSGH 627
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1328
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 416 SPCHQCWSERSVTV-MTSPRLNSNSXASCGVKSYRACTNISMGTTSR 279
SP H E S+ + +T+P+ N+ A K+ + N+S GT SR
Sbjct: 1185 SPYHGMQVEVSMVLNVTNPQFVVNTRAGKNRKTNVSANNVSQGTDSR 1231
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.8 bits (54), Expect = 3.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 145 GVQHFKVLRDASSKFFLWVVKFN 213
G++ F V RDA +FFLW + N
Sbjct: 832 GIKEF-VNRDARKEFFLWALTIN 853
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.8 bits (54), Expect = 3.7
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -1
Query: 305 NISMGTTSRSLSA*RRLQTRYDDNXASSLSELNLTTQRKNL---LEASLNTLKCWTPSGH 135
N +G +S ++A +RLQ L +L+ T RK+L + + + W P H
Sbjct: 76 NTVIGISSNVMAASKRLQME-------DLQQLSRETSRKSLNRRVSFASHARVRWYPKDH 128
Query: 134 LTDKEKS 114
+D EKS
Sbjct: 129 QSDSEKS 135
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 193 LWVVKFNSLNELAXLSS 243
+W +K+NSLN LA L S
Sbjct: 690 VWNIKYNSLNALARLLS 706
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.0 bits (52), Expect = 6.5
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 499 RTMMRAPXMTSXXPSRTKPGTT-RGGELXRPATSAGRSDLSRL 374
R+ +R S P K TT R G+L P + + RS SRL
Sbjct: 622 RSHVRTGSNNSEAPLAAKTSTTKRNGDLLEPQSPSLRSHKSRL 664
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 8.5
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -1
Query: 326 KSYRACTNISMGTTSRSLSA*RRLQTRYDDNXASSLSELNLTTQRKNLLEASLNTLKCWT 147
+S + +S+G+ S S+ R+LQT D S E N Q+K+ E ++++ +
Sbjct: 69 QSRTTVSRVSLGSRQHSSSSIRKLQTNVSD--VRSYDERN---QKKSAFENFVSSMSSFL 123
Query: 146 PSG 138
G
Sbjct: 124 TGG 126
>SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 24.6 bits (51), Expect = 8.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 75 RWLLDKDQRIKPWRLLLISQMSG 143
R +LD+ + +PW L L+ Q+ G
Sbjct: 125 RRVLDRTSKEEPWALRLLRQLEG 147
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,779,612
Number of Sequences: 5004
Number of extensions: 31503
Number of successful extensions: 126
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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