Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060499.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    55   5e-10
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    55   5e-10
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    51   1e-08
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +1

Query: 574 INEPTAAAIAYGLDKKGTGERNVLIFDLG 660
           INEPTAAAIAYGLDKK   ERNVLIFDLG
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLG 29



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 659 GGGTFDVSI 685
           GGGTFDVS+
Sbjct: 29  GGGTFDVSL 37


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +1

Query: 574 INEPTAAAIAYGLDKKGTGERNVLIFDLG 660
           INEPTAAAIAYGLDKK   ERNVLIFDLG
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLG 29



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 659 GGGTFDVSI 685
           GGGTFDVS+
Sbjct: 29  GGGTFDVSL 37


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 574 INEPTAAAIAYGLDKKGTGERNVLIFDLG 660
           INEPTAAAIAYGLDKKG  E+N+L++DLG
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVYDLG 28



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 659 GGGTFDVSI 685
           GGGTFDVSI
Sbjct: 28  GGGTFDVSI 36


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 347 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 472
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 118 LPAREGGDHRQRPGQQDH 171
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 529 TKDAGTISGLNVLRIINEPTAA 594
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/50 (22%), Positives = 20/50 (40%)
 Frame = +2

Query: 203 RLIGDAAKNQVAMNPNNKYSMPNVSSDVSSKMLLCKPT*STGLSRXPSDG 352
           +L+G     +V  +   +Y  PN+   +  ++  C     T  S  P  G
Sbjct: 138 QLLGHFGATKVYNSMKREYYWPNMYRTIKKRLRSCDLCQKTKSSNRPHQG 187


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 308 CTVASSNLRPMRRLASNICCWGSSPP 231
           CT  + N R  R     I C  ++PP
Sbjct: 14  CTYGNVNYRQRRSQPLKISCLKTTPP 39


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 117 TPTQEYVVPRSIPT 76
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,559
Number of Sequences: 336
Number of extensions: 3469
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)