Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060499.seq
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 204 4e-53
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 195 2e-50
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 7e-49
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 158 3e-39
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 91 6e-19
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 55 5e-08
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 39 0.003
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 31 1.1
SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 31 1.1
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 30 1.5
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.6
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 28 6.1
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 28 8.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 204 bits (499), Expect = 4e-53
Identities = 115/213 (53%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Frame = +2
Query: 59 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTXRLIGDAAKNQVA 238
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DT RLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 239 MNPNNKYSMPNVSSDVSSKMLLCKPT*STGLSRXP----SDGGKPKIKVAYKGEDKTFFP 406
MNP N ++ + + K P + ++ P +G +PKI+V +KGE K+FFP
Sbjct: 61 MNPEN--TVFDAKRLIGRK--FDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFP 116
Query: 407 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQKMQVPSQA*TFSESSMNP 586
EE+SSMVLTKMKETAEAYLG V +AV+TVPAYF + + K P
Sbjct: 117 EEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEP 176
Query: 587 XXXXXXXXXXXXXXENEMYLSLTSGGGTFDVSI 685
L GGGTFDVS+
Sbjct: 177 TAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSV 209
Score = 127 bits (307), Expect = 7e-30
Identities = 69/139 (49%), Positives = 83/139 (59%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWXFEXTQ*WRQT*DQGSI*G*RQNLFPRGSQFH 423
P+ +FDAKRLIGRKF+D V DM HW F + + Q G +++ FP
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 424 GAYENEGNCRSLSRQNCAECSYHGSRVLHDSQRQATKDAGTISGLNVLRIINEPTAAAIA 603
+ + + + HDSQRQATKDAGTI+GLNVLRIINEPTAAAIA
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIA 182
Query: 604 YGLDKKGTGERNVLIFDLG 660
YGLDKK ERNVLI+DLG
Sbjct: 183 YGLDKKVGVERNVLIYDLG 201
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 195 bits (476), Expect = 2e-50
Identities = 111/209 (53%), Positives = 124/209 (59%)
Frame = +2
Query: 59 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTXRLIGDAAKNQVA 238
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDT RL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 239 MNPNNKYSMPNVSSDVSSKMLLCKPT*STGLSRXPSDGGKPKIKVAYKGEDKTFFPEEVS 418
+NP N + + SD KPKI+V YKGE KTF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 419 SMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQKMQVPSQA*TFSESSMNPXXXX 598
SMVL KMKETAEAYLG+ V +AVITVPAYF + + K P
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAA 180
Query: 599 XXXXXXXXXXENEMYLSLTSGGGTFDVSI 685
+ L GGGTFDVSI
Sbjct: 181 LAYGLDKSLSGEKNVLIFDLGGGTFDVSI 209
Score = 123 bits (297), Expect = 1e-28
Identities = 68/139 (48%), Positives = 85/139 (61%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWXFEXTQ*WRQT*DQGSI*G*RQNLFPRGSQFH 423
P+ IFDAKRLIGR+++DATVQ+DMK W F+ + Q G R+
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 424 GAYENEGNCRSLSRQNCAECSYHGSRVLHDSQRQATKDAGTISGLNVLRIINEPTAAAIA 603
+ + + Q +DSQRQATKDAGTI+GLNVLR+INEPTAAA+A
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALA 182
Query: 604 YGLDKKGTGERNVLIFDLG 660
YGLDK +GE+NVLIFDLG
Sbjct: 183 YGLDKSLSGEKNVLIFDLG 201
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 190 bits (464), Expect = 7e-49
Identities = 104/175 (59%), Positives = 118/175 (67%), Gaps = 25/175 (14%)
Frame = +2
Query: 59 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTXRLIGDAAKNQVA 238
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD RL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 239 MNPNN-----------KYSMPNVSSDVSS--------------KMLLCKPT*STGLSRXP 343
MNP N ++ P V D+ K+ T +
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 344 SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 508
++ G+PK+KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYF
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 175
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +1
Query: 508 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 660
+DSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLG
Sbjct: 244 NDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLG 294
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/92 (39%), Positives = 44/92 (47%)
Frame = +2
Query: 410 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQKMQVPSQA*TFSESSMNPX 589
++SSMVL KMKETAEAYLG V +AV+TVPAYF + + K P
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 590 XXXXXXXXXXXXXENEMYLSLTSGGGTFDVSI 685
+ L GGGTFDVS+
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSV 302
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWXFE 336
P IFDAKRLIGR+F+D V+ DMKHW FE
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFE 93
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 158 bits (384), Expect = 3e-39
Identities = 96/204 (47%), Positives = 114/204 (55%), Gaps = 1/204 (0%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-XRLIGDAAKNQVAMNPNN 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ RLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 254 KYSMPNVSSDVSSKMLLCKPT*STGLSRXPSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 433
S + + KP ++V K E KTF EE+S+MVLT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 434 KMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQKMQVPSQA*TFSESSMNPXXXXXXXXX 613
KMKETAEAYLGK V +AV+TVPAYF + + K T P
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGM 883
Query: 614 XXXXXENEMYLSLTSGGGTFDVSI 685
E + L GGGTFDVS+
Sbjct: 884 DKKEGEKNI-LVFDLGGGTFDVSL 906
Score = 99 bits (238), Expect = 2e-21
Identities = 56/139 (40%), Positives = 80/139 (57%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWXFEXTQ*WRQT*DQGSI*G*RQNLFPRGSQFH 423
P+ +FDAKRLIGR ++D +VQ D+K + F+ ++ Q + +
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 424 GAYENEGNCRSLSRQNCAECSYHGSRVLHDSQRQATKDAGTISGLNVLRIINEPTAAAIA 603
+ + + + +D+QRQATKDAG I+GL V+RIINEPTAAAIA
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIA 880
Query: 604 YGLDKKGTGERNVLIFDLG 660
YG+DKK GE+N+L+FDLG
Sbjct: 881 YGMDKK-EGEKNILVFDLG 898
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 91.5 bits (217), Expect = 6e-19
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Frame = +2
Query: 65 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTXRLIGDAAKNQVA 238
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 239 MNPNNK-YSMPNVSSDVSSKMLLCKPT*STGLSRXPSDGGKPKIKVAYKGEDKTFFPEEV 415
+NP N Y +K L + G V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 416 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQKMQVPSQA*TFSESSMNPXXX 595
V+ K++ AE L TV AV++VPA F +K + ++ S A +N
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVPAEF-DIKQRNATVKAASLAGITVLRVINEPTA 208
Query: 596 XXXXXXXXXXXENEMYLSLTSGGGTFDVSI 685
+ + GGGT DVS+
Sbjct: 209 AALAYGLHKKEGVANVMVVDLGGGTLDVSL 238
Score = 64.9 bits (151), Expect = 6e-11
Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWXFEXTQ*WRQT*DQGSI*G*RQNLFPRGSQFH 423
P+ I+DAKR IG+ F + K + F T R + G + G + N +
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRG--NAGFLVGKKGNFTVITPEEI 149
Query: 424 GAYENEGNCRSLSRQNCA----ECSYHGSRVLHDSQRQATKDAGTISGLNVLRIINEPTA 591
G Y + R+++ +N + QR AT A +++G+ VLR+INEPTA
Sbjct: 150 GGYVIK-KLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTA 208
Query: 592 AAIAYGLDKKGTGERNVLIFDLG 660
AA+AYGL KK G NV++ DLG
Sbjct: 209 AALAYGLHKK-EGVANVMVVDLG 230
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/48 (52%), Positives = 37/48 (77%)
Frame = +2
Query: 365 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 508
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+F
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHF 49
Score = 50.8 bits (116), Expect = 1e-06
Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 26/70 (37%)
Frame = +1
Query: 508 HDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLD 615
+D+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLD
Sbjct: 50 NDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109
Query: 616 KK--GTGERN 639
K G ERN
Sbjct: 110 KARGGKAERN 119
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Frame = +1
Query: 268 KRLIGRKFEDATVQADMKHWXFEXTQ*WRQT*D-QGSI*G*RQNLFPRGSQFHGAYENEG 444
KR IGRKF D VQ ++ H ++ + + Q G +Q +F +
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLG-KQEVFSPEQVMAMLFTRLK 185
Query: 445 NCRSLS-RQNCAECSYHGSRVLHDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 621
++ + +C D QR+ DA +GLN LR++N+ TA ++AYG+ K+
Sbjct: 186 TTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQ 245
Query: 622 G---TGERNVLIFDLG 660
RNV+ D+G
Sbjct: 246 DLPTDKPRNVVFVDIG 261
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTXRLIGDAAKNQ 232
VG D+G + V + G +E +AN+ +R TPS+V+ D RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +2
Query: 365 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 508
I+V Y G+ + F PE+V +M+ T++K TAE L V + VI+VP+Y+
Sbjct: 160 IQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYY 207
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 128 GKVEIIANDQGNRTTPSYVAFTDTXRLI 211
G IIAND G+R TP+ VAF+DT +LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +1
Query: 508 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLG 660
+ ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G
Sbjct: 117 NQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 359 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 508
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +F
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFF 116
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 459 ISAKLCRM-QLSRFPRTS*LSKTSHKR-CRYHLRLERSPNH 575
+SAKLC + LS+ R HKR C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 869
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 320 STGLSRXPSDGGKPKIKVAYKGEDKTFF-PEEVSSMVLTK 436
S L R P D +P++ V + E+KTF P E+SS+ L+K
Sbjct: 252 SVDLPRPPDDFAEPEVFVTQE-ENKTFSAPSEISSLALSK 290
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 459 ISAKLCRM-QLSRFPRTS*LSKTSHKR-CRYHLRLERSPNH 575
+SAKLC + LS+ R HKR C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 137 EIIANDQGNRTTPSYVAFTDTXRLIGD 217
++I N +G+RTTPS VAFT + D
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERLTD 33
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 5 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 91
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 356 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQK 535
+PK K + E+ EE +M ++K LGK V+ + T +TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 536 MQ 541
Q
Sbjct: 714 SQ 715
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 541 LHLLWLVFESHEVRGNRDNCILHSFAEIS 455
++ LWL F + + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,374,946
Number of Sequences: 59808
Number of extensions: 485299
Number of successful extensions: 1293
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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