Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060498.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.2  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = +3

Query: 72  VIFKA*LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSK 248
           ++F+  L  S  T+   Q++ S        G G+D  E    E    GD  S  A  S+
Sbjct: 654 LLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADAAESE 712


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 625  HNSFPTYNCVLGEINLEVNFNGV 557
            HN    Y CVLGE+  +    G+
Sbjct: 1113 HNCNAYYRCVLGELRKQYCAGGL 1135


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 471 RRCWPKSWSLTIAGHLASRDC 409
           R  W KS  L   GH+  R C
Sbjct: 231 RTIWSKSKLLIPVGHIPIRQC 251


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 499 GDAWPSWRLSALLAKELELD 440
           GD W SW     + +EL LD
Sbjct: 381 GDLWLSWEEGMKVFEELLLD 400


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +2

Query: 545 RKDKHPVKIDFKIYLTENTVIRW 613
           R +K+P ++  + Y+ +    RW
Sbjct: 375 RSNKYPTRVPHRPYVAQYNARRW 397


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 570 ILTGCLSLRSKILFTTCCC 514
           I+ GCL   + I+F+ C C
Sbjct: 257 IIIGCLIQFNTIVFSFCYC 275



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 570 ILTGCLSLRSKILFTTCCC 514
           I+ GCL   + I+F  C C
Sbjct: 538 IIIGCLIQFNTIVFAFCYC 556


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 527 VNKILERKDKHPVKIDFKIYL 589
           +++ L  K   PVKI  K+YL
Sbjct: 106 IDETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 527 VNKILERKDKHPVKIDFKIYL 589
           +++ L  K   PVKI  K+YL
Sbjct: 102 IDETLNSKPLKPVKIRTKVYL 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,979
Number of Sequences: 336
Number of extensions: 2876
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)