Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060498.seq
(687 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine de... 42 0.001
AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-P... 42 0.001
AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-P... 42 0.001
AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-P... 42 0.001
X66098-1|CAA46892.1| 445|Drosophila melanogaster slp2 protein p... 31 1.5
AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer pr... 30 3.4
AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA... 30 3.4
X66097-1|CAA46891.1| 445|Drosophila melanogaster slp2 protein p... 29 6.0
>AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine
decarboxylase antizyme protein.
Length = 254
Score = 41.5 bits (93), Expect = 0.001
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 272 AECFSLCLGAGPLWWS*CPCSRLC---TARRVTGRGCEPRYPGHPQPRRQSRLAKCPAMV 442
+E + + LG GPLWWS P A +TG + ++ ++ ++
Sbjct: 46 SESYRISLGVGPLWWSDVPVHHRTDHDRASLLTGYSRKSSVDSAGGSLYEAS-SRASSLS 104
Query: 443 KLQLFGQQRRESP*WPSVSATAQLQQQVVNKILERKDKHPVKIDFKIYLTENTVIRWEAV 622
Q P S+ + Q+V+ +IL+ PV+I K+++TE+ W +
Sbjct: 105 SSQSDCSDLESQPDIHSLCSDDDC-QEVLRQILQH--DQPVQITIKLHVTEDQYTNWNTI 161
Query: 623 VH--NNMMYSACPGSAVPA 673
++ NN++Y A P PA
Sbjct: 162 LNPVNNLLYVALPKDLPPA 180
>AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-PB,
isoform B protein.
Length = 248
Score = 41.5 bits (93), Expect = 0.001
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 272 AECFSLCLGAGPLWWS*CPCSRLC---TARRVTGRGCEPRYPGHPQPRRQSRLAKCPAMV 442
+E + + LG GPLWWS P A +TG + ++ ++ ++
Sbjct: 40 SESYRISLGVGPLWWSDVPVHHRTDHDRASLLTGYSRKSSVDSAGGSLYEAS-SRASSLS 98
Query: 443 KLQLFGQQRRESP*WPSVSATAQLQQQVVNKILERKDKHPVKIDFKIYLTENTVIRWEAV 622
Q P S+ + Q+V+ +IL+ PV+I K+++TE+ W +
Sbjct: 99 SSQSDCSDLESQPDIHSLCSDDDC-QEVLRQILQH--DQPVQITIKLHVTEDQYTNWNTI 155
Query: 623 VH--NNMMYSACPGSAVPA 673
++ NN++Y A P PA
Sbjct: 156 LNPVNNLLYVALPKDLPPA 174
>AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-PC,
isoform C protein.
Length = 270
Score = 41.5 bits (93), Expect = 0.001
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 272 AECFSLCLGAGPLWWS*CPCSRLC---TARRVTGRGCEPRYPGHPQPRRQSRLAKCPAMV 442
+E + + LG GPLWWS P A +TG + ++ ++ ++
Sbjct: 62 SESYRISLGVGPLWWSDVPVHHRTDHDRASLLTGYSRKSSVDSAGGSLYEAS-SRASSLS 120
Query: 443 KLQLFGQQRRESP*WPSVSATAQLQQQVVNKILERKDKHPVKIDFKIYLTENTVIRWEAV 622
Q P S+ + Q+V+ +IL+ PV+I K+++TE+ W +
Sbjct: 121 SSQSDCSDLESQPDIHSLCSDDDC-QEVLRQILQH--DQPVQITIKLHVTEDQYTNWNTI 177
Query: 623 VH--NNMMYSACPGSAVPA 673
++ NN++Y A P PA
Sbjct: 178 LNPVNNLLYVALPKDLPPA 196
>AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-PA,
isoform A protein.
Length = 254
Score = 41.5 bits (93), Expect = 0.001
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 272 AECFSLCLGAGPLWWS*CPCSRLC---TARRVTGRGCEPRYPGHPQPRRQSRLAKCPAMV 442
+E + + LG GPLWWS P A +TG + ++ ++ ++
Sbjct: 46 SESYRISLGVGPLWWSDVPVHHRTDHDRASLLTGYSRKSSVDSAGGSLYEAS-SRASSLS 104
Query: 443 KLQLFGQQRRESP*WPSVSATAQLQQQVVNKILERKDKHPVKIDFKIYLTENTVIRWEAV 622
Q P S+ + Q+V+ +IL+ PV+I K+++TE+ W +
Sbjct: 105 SSQSDCSDLESQPDIHSLCSDDDC-QEVLRQILQH--DQPVQITIKLHVTEDQYTNWNTI 161
Query: 623 VH--NNMMYSACPGSAVPA 673
++ NN++Y A P PA
Sbjct: 162 LNPVNNLLYVALPKDLPPA 180
>X66098-1|CAA46892.1| 445|Drosophila melanogaster slp2 protein
protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = -1
Query: 321 QDHHRGPAPRHSEKHSASEADRVSVCCRERSETPRHRNKPSRPVWSRRSPHHFH 160
QDHH P+ H S++ + CC + P R W + H H
Sbjct: 357 QDHHHRPSSHHPRAVSSTSDCSTNSCCINMQQPPLWRLIKGNSRWRQHRRRHNH 410
>AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer
protein.
Length = 1854
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = -1
Query: 336 REQGHQDHHRGPAPRHSEKHSASEADRVSVCC------RERSETPRHRNKPSRPVWSRRS 175
R H H P PR S HS S DR + C R+ S +P + + SR S RS
Sbjct: 218 RRSTHSTDHSPPPPRRSHTHSESN-DREYIRCSRDKGSRDWSRSPEYSSHRSRRKRSERS 276
>AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA
protein.
Length = 1854
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = -1
Query: 336 REQGHQDHHRGPAPRHSEKHSASEADRVSVCC------RERSETPRHRNKPSRPVWSRRS 175
R H H P PR S HS S DR + C R+ S +P + + SR S RS
Sbjct: 218 RRSTHSTDHSPPPPRRSHTHSESN-DREYIRCSRDKGSRDWSRSPEYSSHRSRRKRSERS 276
>X66097-1|CAA46891.1| 445|Drosophila melanogaster slp2 protein
protein.
Length = 445
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/52 (25%), Positives = 19/52 (36%)
Frame = -1
Query: 321 QDHHRGPAPRHSEKHSASEADRVSVCCRERSETPRHRNKPSRPVWSRRSPHH 166
QDHH P+ H S++ + CC + P R W + H
Sbjct: 357 QDHHHPPSSHHPRAVSSTSDCNTNSCCINMRQPPLWRLIKGNSRWRQHRRRH 408
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,996,130
Number of Sequences: 53049
Number of extensions: 602932
Number of successful extensions: 2525
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2524
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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