Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060496.seq
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025960-1|ABG02204.1|  433|Drosophila melanogaster IP16063p pro...    29   6.0  
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.    29   6.0  
AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB...    29   6.0  
AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC...    29   6.0  
AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA...    29   6.0  
AE014296-335|AAF47551.2|  858|Drosophila melanogaster CG7991-PA ...    29   6.0  
BT021271-1|AAX33419.1|  842|Drosophila melanogaster RE46655p pro...    29   7.9  
AE014134-2788|AAF53573.1|  842|Drosophila melanogaster CG13272-P...    29   7.9  

>BT025960-1|ABG02204.1|  433|Drosophila melanogaster IP16063p
           protein.
          Length = 433

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 72  PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 182
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 348 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 384


>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
          Length = 2715

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 72  PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 182
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 347 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 383


>AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB,
           isoform B protein.
          Length = 2716

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 72  PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 182
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 348 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 384


>AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC,
           isoform C protein.
          Length = 2556

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 72  PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 182
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 348 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 384


>AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA,
           isoform A protein.
          Length = 2703

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 72  PGPRLP*NPPQGGVLQSISMGRSPL*EWRPNPQRYST 182
           PG  +P  PP G   Q       P  ++ P PQRY T
Sbjct: 348 PGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYPQRYPT 384


>AE014296-335|AAF47551.2|  858|Drosophila melanogaster CG7991-PA
           protein.
          Length = 858

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 400 THSFPTRLKLSSKRTQIVRIPTGGTLLSAY 489
           T   PT+L ++ KR ++ ++P+GG  L+ Y
Sbjct: 311 TEPVPTQLDVTKKRYRVKQLPSGGEPLNGY 340


>BT021271-1|AAX33419.1|  842|Drosophila melanogaster RE46655p
           protein.
          Length = 842

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = +2

Query: 74  GTPTPLKSATRGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLCFRPPLPKDSVSDP 253
           G PT   S    SSP       S +     P+   H +++ +   +  RPP  + S SDP
Sbjct: 244 GAPTSYMSLNHMSSPTTKQAMTSSVVYHQPPAMSHHTSLSSSTPWMTSRPPY-RLSYSDP 302

Query: 254 --LPSLQTFSF*RSPWHISVFI 313
               S+ T+SF R P H    I
Sbjct: 303 HLQESVHTYSFSR-PHHQQTMI 323


>AE014134-2788|AAF53573.1|  842|Drosophila melanogaster CG13272-PA
           protein.
          Length = 842

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = +2

Query: 74  GTPTPLKSATRGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLCFRPPLPKDSVSDP 253
           G PT   S    SSP       S +     P+   H +++ +   +  RPP  + S SDP
Sbjct: 244 GAPTSYMSLNHMSSPTTKQAMTSSVIYHQPPAMSHHTSLSSSTPWMTSRPPY-RLSYSDP 302

Query: 254 --LPSLQTFSF*RSPWHISVFI 313
               S+ T+SF R P H    I
Sbjct: 303 HLQESVHTYSFSR-PHHQQTMI 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,304,247
Number of Sequences: 53049
Number of extensions: 817276
Number of successful extensions: 2428
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2426
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)