Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060494.seq
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    26   0.68 
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     26   0.91 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   4.8  
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            23   8.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.4  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 26.2 bits (55), Expect = 0.68
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 422 SENNETGPAKXQASLHND 475
           S ++E GPA+ +++LHND
Sbjct: 50  SHHSEEGPARRKSNLHND 67


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 25.8 bits (54), Expect = 0.91
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 374 KNIQYISNXXXQANNGSENNETGPAKXQASLHND 475
           KN +       QAN+GS NN +  +  QA  H++
Sbjct: 324 KNKKNSQRQSAQANSGSSNNSSSHSHSQAQPHHN 357


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 2/13 (15%)
 Frame = -1

Query: 281 CSSY--QFFHCKC 249
           CSS+  QFFHC C
Sbjct: 402 CSSFFQQFFHCYC 414


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 410 ANNGSENNETGPAKXQASLHNDQL 481
           A +GS +++ GP+  QAS   + L
Sbjct: 100 ARDGSSSSKNGPSNSQASFRTNFL 123


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 245 RNKFSKHTHFLFNNLMKLVLKVYSIVQSL 159
           R  F KH  +  NN+ K  + +  I+ ++
Sbjct: 715 RLSFRKHVEYACNNVFKAAISLIQIMPNI 743


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,699
Number of Sequences: 2352
Number of extensions: 8696
Number of successful extensions: 70
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)