Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060494.seq
         (530 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001813-1|AAN71568.1|  316|Drosophila melanogaster RH35959p pro...    44   1e-04
AY061202-1|AAL28750.1|  389|Drosophila melanogaster LD15586p pro...    44   1e-04
AE013599-3535|AAM68234.1|  316|Drosophila melanogaster CG3082-PD...    44   1e-04
AE013599-3534|AAF46949.2|  389|Drosophila melanogaster CG3082-PC...    44   1e-04
AE013599-3533|AAF46948.1|  389|Drosophila melanogaster CG3082-PB...    44   1e-04
AE013599-3532|AAF46947.1|  389|Drosophila melanogaster CG3082-PA...    44   1e-04
AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p pro...    28   6.9  
AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB ...    28   6.9  

>BT001813-1|AAN71568.1|  316|Drosophila melanogaster RH35959p
           protein.
          Length = 316

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +3

Query: 366 TSRRTFNTSATXXVKLTTDPKTMKLDQXRXRPLCIMINWLLARXKHRXKYATLY 527
           T   T  TS    V++  DPKT+   +    PL +M+ WL+A+ KH  KYA +Y
Sbjct: 44  TKNMTLYTSTKTQVEV--DPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 95


>AY061202-1|AAL28750.1|  389|Drosophila melanogaster LD15586p
           protein.
          Length = 389

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +3

Query: 366 TSRRTFNTSATXXVKLTTDPKTMKLDQXRXRPLCIMINWLLARXKHRXKYATLY 527
           T   T  TS    V++  DPKT+   +    PL +M+ WL+A+ KH  KYA +Y
Sbjct: 117 TKNMTLYTSTKTQVEV--DPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 168


>AE013599-3535|AAM68234.1|  316|Drosophila melanogaster CG3082-PD,
           isoform D protein.
          Length = 316

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +3

Query: 366 TSRRTFNTSATXXVKLTTDPKTMKLDQXRXRPLCIMINWLLARXKHRXKYATLY 527
           T   T  TS    V++  DPKT+   +    PL +M+ WL+A+ KH  KYA +Y
Sbjct: 44  TKNMTLYTSTKTQVEV--DPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 95


>AE013599-3534|AAF46949.2|  389|Drosophila melanogaster CG3082-PC,
           isoform C protein.
          Length = 389

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +3

Query: 366 TSRRTFNTSATXXVKLTTDPKTMKLDQXRXRPLCIMINWLLARXKHRXKYATLY 527
           T   T  TS    V++  DPKT+   +    PL +M+ WL+A+ KH  KYA +Y
Sbjct: 117 TKNMTLYTSTKTQVEV--DPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 168


>AE013599-3533|AAF46948.1|  389|Drosophila melanogaster CG3082-PB,
           isoform B protein.
          Length = 389

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +3

Query: 366 TSRRTFNTSATXXVKLTTDPKTMKLDQXRXRPLCIMINWLLARXKHRXKYATLY 527
           T   T  TS    V++  DPKT+   +    PL +M+ WL+A+ KH  KYA +Y
Sbjct: 117 TKNMTLYTSTKTQVEV--DPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 168


>AE013599-3532|AAF46947.1|  389|Drosophila melanogaster CG3082-PA,
           isoform A protein.
          Length = 389

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +3

Query: 366 TSRRTFNTSATXXVKLTTDPKTMKLDQXRXRPLCIMINWLLARXKHRXKYATLY 527
           T   T  TS    V++  DPKT+   +    PL +M+ WL+A+ KH  KYA +Y
Sbjct: 117 TKNMTLYTSTKTQVEV--DPKTLAFKKPTGNPLVLMMAWLMAKQKHLKKYAQIY 168


>AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p
           protein.
          Length = 1168

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 425 ENNETGPAKXQASLHNDQLAAGP 493
           E N+T P K +A  HNDQ A  P
Sbjct: 708 EANQTAPEKKKAQAHNDQKADQP 730


>AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB
           protein.
          Length = 1168

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 425 ENNETGPAKXQASLHNDQLAAGP 493
           E N+T P K +A  HNDQ A  P
Sbjct: 708 EANQTAPEKKKAQAHNDQKADQP 730


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,454,228
Number of Sequences: 53049
Number of extensions: 350221
Number of successful extensions: 907
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)