Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060493.seq
(553 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4WCV0 Cluster: Eukaryotic translation initiation facto... 124 1e-27
UniRef50_P47813 Cluster: Eukaryotic translation initiation facto... 117 2e-25
UniRef50_Q7RN51 Cluster: Eukaryotic translation initiation facto... 113 3e-24
UniRef50_A7QB05 Cluster: Chromosome chr5 scaffold_72, whole geno... 101 8e-21
UniRef50_UPI0000DD8698 Cluster: PREDICTED: similar to Eukaryotic... 95 1e-18
UniRef50_Q9AW58 Cluster: Eukaryotic translation initiation facto... 87 2e-16
UniRef50_UPI0000498CC1 Cluster: translation initiation factor eI... 79 9e-14
UniRef50_A0EIP4 Cluster: Chromosome undetermined scaffold_99, wh... 75 8e-13
UniRef50_A4QTW8 Cluster: Eukaryotic translation initiation facto... 66 5e-10
UniRef50_Q22Y66 Cluster: Eukaryotic initiation factor 1A family ... 66 7e-10
UniRef50_Q3LWE9 Cluster: Translation elongation initiation facto... 65 9e-10
UniRef50_A2F1G9 Cluster: Eukaryotic initiation factor 1A family ... 64 3e-09
UniRef50_Q7R1J4 Cluster: GLP_38_12700_12218; n=1; Giardia lambli... 59 6e-08
UniRef50_Q7RN52 Cluster: Putative uncharacterized protein PY0197... 58 2e-07
UniRef50_UPI00015BAF11 Cluster: translation initiation factor 1A... 55 1e-06
UniRef50_Q97W62 Cluster: Translation initiation factor 1A; n=5; ... 53 4e-06
UniRef50_Q0W7X8 Cluster: Translation initiation factor 1A; n=2; ... 52 7e-06
UniRef50_A1RXA3 Cluster: Translation initiation factor eIF-1A; n... 50 3e-05
UniRef50_A3DNJ1 Cluster: S1, IF1 family protein; n=1; Staphyloth... 50 4e-05
UniRef50_Q8TXZ3 Cluster: Translation initiation factor 1A; n=4; ... 49 8e-05
UniRef50_A3H791 Cluster: S1, IF1 type; n=1; Caldivirga maquiling... 48 1e-04
UniRef50_A2BML2 Cluster: Translation initiation factor 1A; n=1; ... 48 1e-04
UniRef50_Q5UZM2 Cluster: Translation initiation factor 1A; n=4; ... 48 1e-04
UniRef50_Q2FSC8 Cluster: Translation initiation factor eIF-1A; n... 48 2e-04
UniRef50_Q4QF06 Cluster: Eukaryotic translation initiation facto... 47 3e-04
UniRef50_A3MTZ0 Cluster: S1, IF1 family protein; n=2; Pyrobaculu... 47 3e-04
UniRef50_Q979F7 Cluster: Translation initiation factor 1A; n=6; ... 47 3e-04
UniRef50_A7I5X8 Cluster: Translation initiation factor eIF-1A; n... 46 4e-04
UniRef50_Q9HN64 Cluster: Translation initiation factor 1A 1; n=8... 46 6e-04
UniRef50_O29481 Cluster: Translation initiation factor 1A; n=4; ... 45 0.001
UniRef50_Q8TSA3 Cluster: Translation initiation factor 1A 1; n=1... 45 0.001
UniRef50_Q1M2Y3 Cluster: Translation initiation factor eIF-1A-li... 45 0.001
UniRef50_Q9DFP1 Cluster: Eukaryotic translation initiation facto... 44 0.002
UniRef50_Q8ZXV9 Cluster: Translation initiation factor 1A; n=3; ... 44 0.003
UniRef50_P57676 Cluster: Translation initiation factor 1A; n=1; ... 44 0.003
UniRef50_Q00X19 Cluster: Vacuolar sorting protein VPS36; n=2; Os... 42 0.010
UniRef50_Q8SS25 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTO... 41 0.017
UniRef50_O59280 Cluster: Translation initiation factor 1A; n=7; ... 41 0.022
UniRef50_Q6LZM1 Cluster: Translation initiation factor 1A; n=6; ... 39 0.067
UniRef50_A0RVP5 Cluster: Translation initiation factor 1; n=4; A... 38 0.20
UniRef50_Q9BSC1 Cluster: MGC11102 protein; n=20; Coelomata|Rep: ... 36 0.63
UniRef50_Q7VCW0 Cluster: Type II restriction enzyme, methylase s... 35 1.4
UniRef50_A0DSZ4 Cluster: Chromosome undetermined scaffold_62, wh... 35 1.4
UniRef50_Q058A4 Cluster: Amidotransferase; n=1; Buchnera aphidic... 33 4.4
UniRef50_Q179M7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_A7S2E3 Cluster: Predicted protein; n=9; Nematostella ve... 33 5.8
UniRef50_Q5K8J4 Cluster: Putative uncharacterized protein; n=2; ... 32 7.7
>UniRef50_Q4WCV0 Cluster: Eukaryotic translation initiation factor
eIF-1A subunit, putative; n=10; Fungi/Metazoa group|Rep:
Eukaryotic translation initiation factor eIF-1A subunit,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 177
Score = 124 bits (300), Expect = 1e-27
Identities = 55/82 (67%), Positives = 66/82 (80%)
Frame = +1
Query: 259 HIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETV 438
HIRGKLRKKVWINQGDIIL+ LRDYQD K DVI+KYT DEAR+LK YGE PE +INET
Sbjct: 88 HIRGKLRKKVWINQGDIILLSLRDYQDEKGDVIMKYTADEARSLKAYGELPEHAKINETD 147
Query: 439 VYSVDGLDEDIEFGDEVSSEDE 504
Y +G ++++EF ++ SEDE
Sbjct: 148 TYGHEGFEDNVEFDEDRESEDE 169
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/43 (74%), Positives = 33/43 (76%)
Frame = +2
Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
LVFKE+GQEYAQV KMLGNGRLEAMCFDG KR G KK
Sbjct: 54 LVFKEEGQEYAQVVKMLGNGRLEAMCFDGEKRLAHIRGKLRKK 96
>UniRef50_P47813 Cluster: Eukaryotic translation initiation factor
1A, X-chromosomal; n=129; Eukaryota|Rep: Eukaryotic
translation initiation factor 1A, X-chromosomal - Homo
sapiens (Human)
Length = 144
Score = 117 bits (282), Expect = 2e-25
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
CHIRGKLRKKVWIN DIIL+GLRDYQD KADVILKY DEAR+LK YGE PE +INET
Sbjct: 59 CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118
Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
+ G D++I+F D++ +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/43 (76%), Positives = 34/43 (79%)
Frame = +2
Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KR G KK
Sbjct: 26 LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68
>UniRef50_Q7RN51 Cluster: Eukaryotic translation initiation factor
1a; n=1; Plasmodium yoelii yoelii|Rep: Eukaryotic
translation initiation factor 1a - Plasmodium yoelii
yoelii
Length = 124
Score = 113 bits (271), Expect = 3e-24
Identities = 51/79 (64%), Positives = 63/79 (79%)
Frame = +1
Query: 265 RGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETVVY 444
RGK+RK+VWIN GDIIL+ LRDYQD+KADVI KYTPDEAR+LK +GE PET +INET ++
Sbjct: 9 RGKMRKRVWINSGDIILVSLRDYQDSKADVIAKYTPDEARSLKAHGELPETAKINETDIF 68
Query: 445 SVDGLDEDIEFGDEVSSED 501
DG +EF D+ S E+
Sbjct: 69 DDDG-QHGVEFLDDESDEE 86
>UniRef50_A7QB05 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 310
Score = 101 bits (243), Expect = 8e-21
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
CHIRGK+ KKVWI GDIIL+ L DYQD KADVILKY PDEAR LK YGE PE R+NE
Sbjct: 59 CHIRGKMHKKVWIAAGDIILVSLHDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEG 118
Query: 436 VVYSVDGLDE 465
+ GLDE
Sbjct: 119 I---AGGLDE 125
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = +2
Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
LVFKEDGQEYAQV +MLGNGR EAMC DG KR G KK
Sbjct: 26 LVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKK 68
>UniRef50_UPI0000DD8698 Cluster: PREDICTED: similar to Eukaryotic
translation initiation factor 1A (eIF-1A) (eIF-4C)
(Liver regeneration-related protein LRRG048); n=1; Homo
sapiens|Rep: PREDICTED: similar to Eukaryotic
translation initiation factor 1A (eIF-1A) (eIF-4C)
(Liver regeneration-related protein LRRG048) - Homo
sapiens
Length = 118
Score = 95.1 bits (226), Expect = 1e-18
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +1
Query: 286 VWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDE 465
VWIN DIIL+GLRDYQD KADVILKY DEAR+LK YGE PE +INET + G D+
Sbjct: 43 VWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFG-PGDDD 101
Query: 466 DIEFGDEVSSEDEAV 510
+I+F D++ +DE +
Sbjct: 102 EIQF-DDIGDDDEDI 115
>UniRef50_Q9AW58 Cluster: Eukaryotic translation initiation factor
1A; n=1; Guillardia theta|Rep: Eukaryotic translation
initiation factor 1A - Guillardia theta (Cryptomonas
phi)
Length = 143
Score = 87.4 bits (207), Expect = 2e-16
Identities = 35/54 (64%), Positives = 45/54 (83%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPET 417
CHIRGK+RKKVWIN GDI+L+ LRD+Q+ K D+I KY+PDE+R L+ +GE P T
Sbjct: 58 CHIRGKMRKKVWINTGDIVLVALRDFQNNKGDIIHKYSPDESRKLRAFGELPLT 111
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +2
Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
L+FK++ QEY QV KMLGNGR + CFDGI+R G KK
Sbjct: 25 LIFKDNCQEYGQVIKMLGNGRCDTYCFDGIRRLCHIRGKMRKK 67
>UniRef50_UPI0000498CC1 Cluster: translation initiation factor
eIF-1A; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
translation initiation factor eIF-1A - Entamoeba
histolytica HM-1:IMSS
Length = 171
Score = 78.6 bits (185), Expect = 9e-14
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
CHIRG++++KVWIN D+IL+ LR+Y+D KADVI KY DE LK Y E P+ + E
Sbjct: 59 CHIRGQMQRKVWINVNDVILVSLREYEDGKADVIKKYNSDEIIQLKKYKEIPDRLPA-ED 117
Query: 436 VVYSVD-----GLDEDIEFGDEVSSED 501
V D G+ +DI DE++ ED
Sbjct: 118 VEEKKDVGIKFGVGDDIS-DDEINEED 143
Score = 63.3 bits (147), Expect = 4e-09
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +2
Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
LVFKE+GQEY QVT+MLGNGRLEA CFDG R+ G ++K
Sbjct: 26 LVFKEEGQEYGQVTRMLGNGRLEAYCFDGKTRQCHIRGQMQRK 68
>UniRef50_A0EIP4 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_99, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 75.4 bits (177), Expect = 8e-13
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 259 HIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETV 420
HIRGK+R+KVWI GDI+L+ LR++QD K DV+ KY P+E + LK E PE +
Sbjct: 60 HIRGKMRRKVWIQNGDIVLVALREFQDEKCDVVYKYFPEEIKQLKNLKEIPENL 113
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 167 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRRV 259
KEDGQ+YAQV K+LGNGRL +C K+R+
Sbjct: 28 KEDGQDYAQVIKLLGNGRLICVCLGDSKQRL 58
>UniRef50_A4QTW8 Cluster: Eukaryotic translation initiation factor
1A-like protein; n=2; Magnaporthe grisea|Rep: Eukaryotic
translation initiation factor 1A-like protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 187
Score = 66.1 bits (154), Expect = 5e-10
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETVV 441
IRGKLRKK W+ GD++L+ + + K ++ +Y DEAR +K E P VRINET V
Sbjct: 90 IRGKLRKKQWVQAGDLVLMQVWPNERHKGSIVERYPSDEARKIKEEHELPSYVRINETDV 149
Query: 442 YSVDGLDED-IEFGDEVSSED 501
+ D+D EF EV+ ED
Sbjct: 150 GGENRDDDDGFEFA-EVAGED 169
>UniRef50_Q22Y66 Cluster: Eukaryotic initiation factor 1A family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Eukaryotic initiation factor 1A family protein -
Tetrahymena thermophila SB210
Length = 213
Score = 65.7 bits (153), Expect = 7e-10
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNL 390
+RG+LR K+++N+GDI+L+GLRDYQD K D+ILKY +E R L
Sbjct: 61 LRGRLRYKIYVNEGDIVLVGLRDYQDDKCDIILKYHKEETRQL 103
>UniRef50_Q3LWE9 Cluster: Translation elongation initiation factor
4C; n=1; Bigelowiella natans|Rep: Translation elongation
initiation factor 4C - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 124
Score = 65.3 bits (152), Expect = 9e-10
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGE 405
C IRGKLRK VWI +GDIIL+ LR+Y D K DV+ +YT D+ +L G+
Sbjct: 61 CTIRGKLRKTVWIREGDIILVSLREYDDFKGDVLCRYTLDQINSLIASGD 110
>UniRef50_A2F1G9 Cluster: Eukaryotic initiation factor 1A family
protein; n=1; Trichomonas vaginalis G3|Rep: Eukaryotic
initiation factor 1A family protein - Trichomonas
vaginalis G3
Length = 139
Score = 63.7 bits (148), Expect = 3e-09
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
C +RGK R +++INQGD +LI LR+ +D KAD+I KYT DEA L GE E +T
Sbjct: 57 CKVRGKFRGRLFINQGDYLLIALREEEDDKADIIHKYTTDEAHELFKMGEVNERDFTTQT 116
Query: 436 VVYSVDGLDEDI 471
+ G D +
Sbjct: 117 EESAQGGDDNGV 128
>UniRef50_Q7R1J4 Cluster: GLP_38_12700_12218; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_38_12700_12218 - Giardia lamblia
ATCC 50803
Length = 160
Score = 59.3 bits (137), Expect = 6e-08
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Frame = +1
Query: 256 CHIRGKLRKK-VWINQGDIILIGLRDYQ-DAKADVILKYTPDEARNLKTYGEFP---ETV 420
CH+RG L+K+ V ++ GD++L+ LR++ + AD++ KY PDE + LK YGE + +
Sbjct: 58 CHLRGALKKRRVMMHAGDLVLVSLREFSTETDADIVHKYQPDEVKELKKYGEITVDLDEI 117
Query: 421 RINETVVYSVDGLD 462
E V+ VD D
Sbjct: 118 LDREVEVFRVDQKD 131
Score = 36.7 bits (81), Expect = 0.36
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
LV+K + + Y TK+LG G C DGI+RR G +K+
Sbjct: 25 LVYKGESEVYGVCTKVLGCGYYTIYCLDGIRRRCHLRGALKKR 67
>UniRef50_Q7RN52 Cluster: Putative uncharacterized protein PY01972;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY01972 - Plasmodium yoelii
yoelii
Length = 133
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2
Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKR 253
L++KE+ QEYAQV +MLGNGRLEA CFDG+KR
Sbjct: 95 LLYKEEDQEYAQVLRMLGNGRLEAHCFDGVKR 126
>UniRef50_UPI00015BAF11 Cluster: translation initiation factor 1A
(aeIF-1A); n=1; Ignicoccus hospitalis KIN4/I|Rep:
translation initiation factor 1A (aeIF-1A) - Ignicoccus
hospitalis KIN4/I
Length = 132
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETV 420
I GKLR++VWI +GDI++ + D+Q KAD++ +Y+ DE + L G P+ +
Sbjct: 52 IPGKLRRRVWIREGDIVIATVWDFQPKKADIVYRYSRDELKRLIVKGLLPKEI 104
>UniRef50_Q97W62 Cluster: Translation initiation factor 1A; n=5;
Sulfolobaceae|Rep: Translation initiation factor 1A -
Sulfolobus solfataricus
Length = 108
Score = 53.2 bits (122), Expect = 4e-06
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNL 390
I GK+RKK+W+ +GD++L+G+ D+Q + D++ KY DE + L
Sbjct: 50 IPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
Score = 33.1 bits (72), Expect = 4.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 170 EDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
E+GQ V KMLG L +C DG +R G KK
Sbjct: 19 EEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKK 57
>UniRef50_Q0W7X8 Cluster: Translation initiation factor 1A; n=2;
Euryarchaeota|Rep: Translation initiation factor 1A -
Uncultured methanogenic archaeon RC-I
Length = 96
Score = 52.4 bits (120), Expect = 7e-06
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 402
C IRGK++K+ W+ +GDI+++ D+Q+ K D+I +YT +A L G
Sbjct: 43 CRIRGKMKKRTWVREGDIVIVVPWDFQNDKGDIIWRYTGPQAEWLSRKG 91
>UniRef50_A1RXA3 Cluster: Translation initiation factor eIF-1A; n=1;
Thermofilum pendens Hrk 5|Rep: Translation initiation
factor eIF-1A - Thermofilum pendens (strain Hrk 5)
Length = 105
Score = 50.4 bits (115), Expect = 3e-05
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPE 414
C I GK +K++W+ GD++L+ D+Q + D+I +YT +E + L+ G E
Sbjct: 47 CRIPGKFKKRMWMKVGDVVLVAPWDFQPERGDIIYRYTSNELQKLEKKGLLKE 99
>UniRef50_A3DNJ1 Cluster: S1, IF1 family protein; n=1;
Staphylothermus marinus F1|Rep: S1, IF1 family protein -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 111
Score = 50.0 bits (114), Expect = 4e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFP 411
I GK+R++VW+N+GDI+L+ + D+ + +VI KY+ E L G P
Sbjct: 51 IPGKMRRRVWMNEGDIVLVAIWDFSPERGEVIHKYSRSEVTKLVERGVIP 100
>UniRef50_Q8TXZ3 Cluster: Translation initiation factor 1A; n=4;
Euryarchaeota|Rep: Translation initiation factor 1A -
Methanopyrus kandleri
Length = 111
Score = 48.8 bits (111), Expect = 8e-05
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETV 420
I GK+RK+VWI +GD++L+ ++Q +ADV +YT + LK G+ E V
Sbjct: 48 IPGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDERV 100
Score = 32.3 bits (70), Expect = 7.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 170 EDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
++G+ + V KMLGN R++ C DG R G K+
Sbjct: 17 KEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKR 55
>UniRef50_A3H791 Cluster: S1, IF1 type; n=1; Caldivirga
maquilingensis IC-167|Rep: S1, IF1 type - Caldivirga
maquilingensis IC-167
Length = 102
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETV-RINE 432
I GK RK++WI GD +++ D++ +KADV+ KY E L+ ++ E + R++E
Sbjct: 42 IPGKYRKRMWIRIGDYLIVAPWDFEPSKADVVYKYEKGEVNELRRISKYSEVLNRLDE 99
>UniRef50_A2BML2 Cluster: Translation initiation factor 1A; n=1;
Hyperthermus butylicus DSM 5456|Rep: Translation
initiation factor 1A - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 84
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPE 414
I G +R++VWI +GDI+L D++ +ADV+ +Y+ +E R L G P+
Sbjct: 24 IPGSMRRRVWIREGDIVLAAPWDFKPDRADVVYRYSREELRKLVEKGIVPQ 74
>UniRef50_Q5UZM2 Cluster: Translation initiation factor 1A; n=4;
Halobacteriaceae|Rep: Translation initiation factor 1A -
Haloarcula marismortui (Halobacterium marismortui)
Length = 95
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPE 414
I GK++K++WI + D++L+ D+QD KAD+ +Y +A L+ G E
Sbjct: 45 IPGKMQKRIWIREDDVVLVEPWDWQDEKADITWRYEKQDADQLREEGHIQE 95
Score = 32.7 bits (71), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 170 EDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
E+ + +A V MLG R++ C DG++R G +K+
Sbjct: 14 EEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKR 52
>UniRef50_Q2FSC8 Cluster: Translation initiation factor eIF-1A; n=3;
Methanomicrobiales|Rep: Translation initiation factor
eIF-1A - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 113
Score = 47.6 bits (108), Expect = 2e-04
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDE 378
I+GK++K+ WI +GDII+I +QD K D+ +YTP +
Sbjct: 65 IKGKMKKRAWIREGDIIIIVPWSFQDDKCDITYRYTPPQ 103
>UniRef50_Q4QF06 Cluster: Eukaryotic translation initiation factor
1A, putative; n=7; Trypanosomatidae|Rep: Eukaryotic
translation initiation factor 1A, putative - Leishmania
major
Length = 168
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDY-QDAKADVILKYTPDEARNLKTYGEFPETVRINE 432
IRG + +KVWI QGD++L+ R++ ++ D+I ++TP E R L P R E
Sbjct: 65 IRGAMVRKVWIGQGDVVLVAKREFNENDVVDIIHRFTPAEVRLLVKENAIPRDFRSAE 122
>UniRef50_A3MTZ0 Cluster: S1, IF1 family protein; n=2;
Pyrobaculum|Rep: S1, IF1 family protein - Pyrobaculum
calidifontis (strain JCM 11548 / VA1)
Length = 99
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 268 GKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETV 420
G+LRKK+W+ GD +++ L D++ K D++ KY + LK G F E +
Sbjct: 43 GRLRKKLWLKAGDYVIVALWDFEKDKGDIVHKYDKRDVEELKRRG-FAEAI 92
>UniRef50_Q979F7 Cluster: Translation initiation factor 1A; n=6;
Euryarchaeota|Rep: Translation initiation factor 1A -
Thermoplasma volcanium
Length = 123
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRI 426
I G++RK++WI + D++++ ++Q KADV+ +YT +A L PE + I
Sbjct: 67 IPGRMRKRMWIREKDLVIVKPWEFQPEKADVVYRYTKTQASYLSRNHMLPEVIDI 121
>UniRef50_A7I5X8 Cluster: Translation initiation factor eIF-1A; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Translation
initiation factor eIF-1A - Methanoregula boonei (strain
6A8)
Length = 131
Score = 46.4 bits (105), Expect = 4e-04
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDE 378
I+GK++K+VWI +GD ++I ++QD K D+I +Y P +
Sbjct: 83 IKGKIKKRVWIREGDTLIIVPWNFQDDKCDIIYRYLPPQ 121
>UniRef50_Q9HN64 Cluster: Translation initiation factor 1A 1; n=8;
Halobacteriaceae|Rep: Translation initiation factor 1A 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 95
Score = 46.0 bits (104), Expect = 6e-04
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 402
I G+++K++WI + DI+L+ D+QD KADV +Y +A L+ G
Sbjct: 46 IPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEG 92
Score = 35.5 bits (78), Expect = 0.83
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 170 EDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
ED + +A+VT MLG R++ C DG +R G +K+
Sbjct: 15 EDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKR 53
>UniRef50_O29481 Cluster: Translation initiation factor 1A; n=4;
Euryarchaeota|Rep: Translation initiation factor 1A -
Archaeoglobus fulgidus
Length = 97
Score = 45.2 bits (102), Expect = 0.001
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 402
I GK+RKK+WI +GD++++ +Q +AD++ +YT + L+ G
Sbjct: 47 IPGKMRKKIWIREGDVVIVVPWSFQKDRADIVWRYTNPQVEWLERKG 93
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 167 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
++ G+ + VT MLG G ++ C DG++R G KK
Sbjct: 15 RKKGELFGVVTSMLGAGHIKVRCEDGVERLARIPGKMRKK 54
>UniRef50_Q8TSA3 Cluster: Translation initiation factor 1A 1; n=13;
Euryarchaeota|Rep: Translation initiation factor 1A 1 -
Methanosarcina acetivorans
Length = 111
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 402
I G ++KK WI +GD++++ ++Q+ KADVI KYT + L+ G
Sbjct: 61 IPGSMKKKTWIREGDVVIVVPWEFQNEKADVIWKYTRPQVDWLERKG 107
>UniRef50_Q1M2Y3 Cluster: Translation initiation factor eIF-1A-like;
n=1; Platanus x acerifolia|Rep: Translation initiation
factor eIF-1A-like - Platanus acerifolia (London plane
tree)
Length = 50
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 370 PDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEFGDE-VSSEDEAV 510
PDEAR LK YGE PE R+NE + +D +ED GD+ + EDE +
Sbjct: 2 PDEARLLKAYGELPENTRLNEGIAAGLD--EEDDGAGDDYIEFEDEDI 47
>UniRef50_Q9DFP1 Cluster: Eukaryotic translation initiation factor
1A; n=1; Gillichthys mirabilis|Rep: Eukaryotic
translation initiation factor 1A - Gillichthys mirabilis
(Long-jawed mudsucker)
Length = 70
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2
Query: 185 YAQVTKMLGNGRLEAMCFDGIKRRVTSE 268
YA V KMLGNGRL+AMCFDG VTS+
Sbjct: 36 YALVIKMLGNGRLDAMCFDGSNGFVTSD 63
>UniRef50_Q8ZXV9 Cluster: Translation initiation factor 1A; n=3;
Pyrobaculum|Rep: Translation initiation factor 1A -
Pyrobaculum aerophilum
Length = 114
Score = 43.6 bits (98), Expect = 0.003
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 268 GKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETV 420
G+LR+++W+ GD +++ L D+ K D++ KY + LK G F E +
Sbjct: 58 GRLRRRLWLKAGDYVIVALWDFDREKGDIVHKYEKRDVEELKRRG-FAEAI 107
>UniRef50_P57676 Cluster: Translation initiation factor 1A; n=1;
Aeropyrum pernix|Rep: Translation initiation factor 1A -
Aeropyrum pernix
Length = 111
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPE 414
I GK+R++VW+ +GD++L D K +V+ +Y DE R L PE
Sbjct: 51 IPGKMRRRVWMREGDVVLFLPWGTADKKGEVVYRYLRDEVRKLIDMNLLPE 101
>UniRef50_Q00X19 Cluster: Vacuolar sorting protein VPS36; n=2;
Ostreococcus|Rep: Vacuolar sorting protein VPS36 -
Ostreococcus tauri
Length = 558
Score = 41.9 bits (94), Expect = 0.010
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 432 LIDADRLWEFSIRL*IPSFVRGIFQDDISFRILIIS*AY*YYVSLIYPHFFS*FPSDVTR 253
++ A+RL +F++RL F+ +FQDDI IL + A V ++PH + F ++VT+
Sbjct: 424 IVHAERLRKFAVRLQGARFIGQVFQDDIRLFILEVPQAQEDDVPGVHPHLLAHFTANVTQ 483
Query: 252 RLMP-SKHM 229
L P ++H+
Sbjct: 484 PLHPHAEHL 492
>UniRef50_Q8SS25 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTOR
1A; n=1; Encephalitozoon cuniculi|Rep: EUKARYOTIC
TRANSLATION INITIATION FACTOR 1A - Encephalitozoon
cuniculi
Length = 119
Score = 41.1 bits (92), Expect = 0.017
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGE 405
+RG+ ++V + GDI+L+ +RD + +AD+ KY P E + LK GE
Sbjct: 50 VRGRDYRRVRMVPGDIVLLRVRDGDEKRADIDRKYMPKEVKILKEDGE 97
>UniRef50_O59280 Cluster: Translation initiation factor 1A; n=7;
Euryarchaeota|Rep: Translation initiation factor 1A -
Pyrococcus horikoshii
Length = 115
Score = 40.7 bits (91), Expect = 0.022
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDEARNLKTYGEFPE 414
C I GKLR++VWI GD++++ Q D + D++ +YT + L G+ +
Sbjct: 51 CRIPGKLRRRVWIRVGDLVIVQPWPVQSDKRGDIVYRYTQTQVDWLLRKGKITQ 104
>UniRef50_Q6LZM1 Cluster: Translation initiation factor 1A; n=6;
Euryarchaeota|Rep: Translation initiation factor 1A -
Methanococcus maripaludis
Length = 104
Score = 39.1 bits (87), Expect = 0.067
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDEA--RNLKTYGEF 408
I GKL++K+W+ + D++++ + Q D K DVI +YT + N K Y +F
Sbjct: 51 IPGKLKRKIWVREDDVVIVTPWEVQSDEKCDVIWRYTKGQVDWLNRKGYLDF 102
>UniRef50_A0RVP5 Cluster: Translation initiation factor 1; n=4;
Archaea|Rep: Translation initiation factor 1 -
Cenarchaeum symbiosum
Length = 185
Score = 37.5 bits (83), Expect = 0.20
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDEARNLKTYGEFP 411
IRGKL++++WI DI+++ D++ + D+I ++T + LK P
Sbjct: 132 IRGKLKRRIWIRDNDIVILAPWDFKATERGDIIWRFTLPQVDWLKDNDHLP 182
>UniRef50_Q9BSC1 Cluster: MGC11102 protein; n=20; Coelomata|Rep:
MGC11102 protein - Homo sapiens (Human)
Length = 165
Score = 35.9 bits (79), Expect = 0.63
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 271 KLRKKVWINQGDIILIG-LRDYQDAKADVILKYTPDEARNLKTYGEFPE 414
K RK +WI +GD +++ + + + KA++ D R+L+ G +PE
Sbjct: 56 KYRKNIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKEGFWPE 104
>UniRef50_Q7VCW0 Cluster: Type II restriction enzyme, methylase
subunit; n=17; cellular organisms|Rep: Type II
restriction enzyme, methylase subunit - Prochlorococcus
marinus
Length = 915
Score = 34.7 bits (76), Expect = 1.4
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 262 IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
I+GKLR +W+N D Y+DAK + L Y ++ R +T + P T ++ +T
Sbjct: 690 IKGKLRYCIWVNDDD--------YEDAKKNQWLMYRFEQVREKRTASDRPTTKKLAKT 739
>UniRef50_A0DSZ4 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=5; cellular organisms|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 3255
Score = 34.7 bits (76), Expect = 1.4
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = +1
Query: 280 KKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETV 438
K+VW ++ DI+L + YQ DV L + ++ + ++ G+ + ++ +T+
Sbjct: 287 KRVWSHKQDIMLSDINKYQQEFCDVFLLFLKNDWKEIEQLGDVDQILQFKQTI 339
>UniRef50_Q058A4 Cluster: Amidotransferase; n=1; Buchnera aphidicola
str. Cc (Cinara cedri)|Rep: Amidotransferase - Buchnera
aphidicola subsp. Cinara cedri
Length = 196
Score = 33.1 bits (72), Expect = 4.4
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -1
Query: 277 VVSLGCDTAFD---AIKAHGLQAAITEHLCDLGVLLSVFLKDQLTFFSFIFVLSSPPIFS 107
+++ GC F +IK G +T+ +CD+ +FL T +++L IFS
Sbjct: 5 IINTGCSNLFSLYSSIKRLGYNVNVTDSICDIKKAKKIFLPGVGTAAYILYILKKKKIFS 64
Query: 106 SFTFVFRHVL 77
+ + +L
Sbjct: 65 LIKYTNQPIL 74
>UniRef50_Q179M7 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 421
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 81 TCRKTKVKEEKIGGEERTKMKLKNVSWSLRKTDKSTPKSQRCSV 212
T RKT VK++KI E+ K KLK S ++ DK+T K + V
Sbjct: 255 TLRKTIVKQKKITEEDTDKDKLKTQSSITQQDDKATVKRTKFRV 298
>UniRef50_A7S2E3 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 428
Score = 32.7 bits (71), Expect = 5.8
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 90 KTKVKEEKIGGEERTKMKLKNVSWSLRKTDKSTPKSQRCSVMAAWRP--CALMASNAVSH 263
K KV++EK GEE K ++ + + ++ + ++ KS+R S M P AL + +
Sbjct: 264 KKKVEQEKAKGEEIRKRAMEKLGDTKKREESASKKSRRDSPMEWTTPHDAALCREVLLQN 323
Query: 264 PRETTKKSVDKSR 302
P KK+ +++
Sbjct: 324 PYTERKKTTQRAK 336
>UniRef50_Q5K8J4 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 998
Score = 32.3 bits (70), Expect = 7.7
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 162 SLRKTDKSTPKSQRCSVMAAWRPCALMASNAVSHPRETTKKSVDKSRRHNINRPTRLSR 338
S K D STPK S +A P L++++ V HP T K++ R N +P L R
Sbjct: 58 STPKVD-STPKDSGTSASSALTPPKLLSTHLVKHPNHTVAKAI----RTNFPQPNPLLR 111
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,073,031
Number of Sequences: 1657284
Number of extensions: 8082574
Number of successful extensions: 24440
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 23721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24426
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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