Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060493.seq
         (553 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L18960-1|AAA19812.1|  144|Homo sapiens protein synthesis factor ...   117   2e-26
BT007201-1|AAP35865.1|  144|Homo sapiens eukaryotic translation ...   117   2e-26
BT007064-1|AAP35727.1|  144|Homo sapiens eukaryotic translation ...   117   2e-26
BC110421-1|AAI10422.1|  144|Homo sapiens EIF1AP1 protein protein.     117   2e-26
BC067851-1|AAH67851.1|  144|Homo sapiens eukaryotic translation ...   117   2e-26
BC005248-1|AAH05248.1|  144|Homo sapiens eukaryotic translation ...   117   2e-26
BC000793-1|AAH00793.1|  144|Homo sapiens eukaryotic translation ...   117   2e-26
AL732366-5|CAI40551.1|  116|Homo sapiens eukaryotic translation ...   117   2e-26
AL732366-4|CAI40550.1|  144|Homo sapiens eukaryotic translation ...   117   2e-26
AF000987-1|AAC51834.1|  144|Homo sapiens eIF-1A, Y isoform protein.   114   2e-25
BC005131-1|AAH05131.1|  165|Homo sapiens MGC11102 protein protein.     36   0.095
AK094129-1|BAC04293.1|  165|Homo sapiens protein ( Homo sapiens ...    36   0.095

>L18960-1|AAA19812.1|  144|Homo sapiens protein synthesis factor
           protein.
          Length = 144

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 33/43 (76%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>BT007201-1|AAP35865.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, Y chromosome protein.
          Length = 144

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 32/43 (74%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEA+CFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKK 68


>BT007064-1|AAP35727.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A protein.
          Length = 144

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 33/43 (76%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>BC110421-1|AAI10422.1|  144|Homo sapiens EIF1AP1 protein protein.
          Length = 144

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 33/43 (76%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>BC067851-1|AAH67851.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, X-linked protein.
          Length = 144

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 33/43 (76%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>BC005248-1|AAH05248.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, Y-linked protein.
          Length = 144

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 32/43 (74%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEA+CFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKK 68


>BC000793-1|AAH00793.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, X-linked protein.
          Length = 144

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 33/43 (76%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>AL732366-5|CAI40551.1|  116|Homo sapiens eukaryotic translation
           initiation factor 1A, X-linked protein.
          Length = 116

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 31  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 90

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 91  DTFG-PGDDDEIQF-DDIGDDDEDI 113



 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 25/36 (69%), Positives = 27/36 (75%)
 Frame = +2

Query: 179 QEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           +EYAQV KMLGNGRLEAMCFDG+KR     G   KK
Sbjct: 5   KEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 40


>AL732366-4|CAI40550.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, X-linked protein.
          Length = 144

 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YGE PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 33/43 (76%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>AF000987-1|AAC51834.1|  144|Homo sapiens eIF-1A, Y isoform protein.
          Length = 144

 Score =  114 bits (275), Expect = 2e-25
 Identities = 54/85 (63%), Positives = 65/85 (76%)
 Frame = +1

Query: 256 CHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINET 435
           CHIRGKLRKKVWIN  DIIL+GLRDYQD KADVILKY  DEAR+LK YG  PE  +INET
Sbjct: 59  CHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGGLPEHAKINET 118

Query: 436 VVYSVDGLDEDIEFGDEVSSEDEAV 510
             +   G D++I+F D++  +DE +
Sbjct: 119 DTFG-PGDDDEIQF-DDIGDDDEDI 141



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 32/43 (74%), Positives = 34/43 (79%)
 Frame = +2

Query: 158 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRRVTSEGNYEKK 286
           LVFKEDGQEYAQV KMLGNGRLEA+CFDG+KR     G   KK
Sbjct: 26  LVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKK 68


>BC005131-1|AAH05131.1|  165|Homo sapiens MGC11102 protein protein.
          Length = 165

 Score = 35.9 bits (79), Expect = 0.095
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 271 KLRKKVWINQGDIILIG-LRDYQDAKADVILKYTPDEARNLKTYGEFPE 414
           K RK +WI +GD +++  + + +  KA++      D  R+L+  G +PE
Sbjct: 56  KYRKNIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKEGFWPE 104


>AK094129-1|BAC04293.1|  165|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36810 fis, clone ASTRO2001249. ).
          Length = 165

 Score = 35.9 bits (79), Expect = 0.095
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 271 KLRKKVWINQGDIILIG-LRDYQDAKADVILKYTPDEARNLKTYGEFPE 414
           K RK +WI +GD +++  + + +  KA++      D  R+L+  G +PE
Sbjct: 56  KYRKNIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKEGFWPE 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,123,335
Number of Sequences: 237096
Number of extensions: 1233165
Number of successful extensions: 6504
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6504
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)