Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060492.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.    24   5.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.8  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    23   9.0  

>AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 474 NSTSTTIMCSNTALEXRRYINDASCM 551
           ++T+ T++C    L    Y+ DA C+
Sbjct: 33  STTNRTLLCWAIKLSPTAYVTDAECV 58



 Score = 23.4 bits (48), Expect = 6.8
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -3

Query: 388 HRQHEVIVIFGYXF---HVQQVAKREYXXLRQKXLLRHRXPN 272
           HR+H++++I+G       VQ+   R+   LRQ    R+R P+
Sbjct: 61  HRKHQIVMIYGDIAPNRTVQERLGRKVAGLRQ-PACRYRVPS 101


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/50 (22%), Positives = 22/50 (44%)
 Frame = +2

Query: 158  RMLRTRRFYSXVSQQIGLENYFNFAVVDNNRQRXKSHXIWXSVSEQXFLT 307
            ++++ + F+     ++    Y  F          KS  IW ++ E+ FLT
Sbjct: 2278 QLIKAKYFHGLEELKLAPLTYHTFHKEIKGIDEAKSKNIWDALREKSFLT 2327


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 458 FKEPIKQYIDYDY 496
           F+EPI +Y+DY +
Sbjct: 159 FQEPIAKYLDYHF 171


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,765
Number of Sequences: 2352
Number of extensions: 13684
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)