Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060491.seq
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 224 NFAVVDNNRQRFKSHLIWS 280
           N +++D ++Q +  HL+WS
Sbjct: 277 NESIIDLSQQTYNVHLMWS 295


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 9   GNDMAPTQGLQRALKQKEYIKIIELAVKSPNNRVYLLNL 125
           G D +P   LQRA   K Y +    A K P + + L+ +
Sbjct: 114 GGDTSPNSALQRARADKTYRRSYTHA-KPPYSYISLITM 151


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -3

Query: 427 YAFPI*FVCVFLLHRQHEVIVIFGYFFH 344
           Y   + F C F++   H + ++  Y+F+
Sbjct: 262 YYMHLLFCCAFIIFTMHLLFLLCIYYFY 289


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 221  FNFAVVDNNRQRFKSHLIWSLVSEQ 295
            + FAV+D++    K H  W+ +  +
Sbjct: 2355 YGFAVLDSSSMTLKPHDSWADIDNE 2379


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 511 HLNAALINDASCMENVNLSAYMQDCVK 591
           HL A+     SCME  +L  Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 511 HLNAALINDASCMENVNLSAYMQDCVK 591
           HL A+     SCME  +L  Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 511 HLNAALINDASCMENVNLSAYMQDCVK 591
           HL A+     SCME  +L  Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,690
Number of Sequences: 336
Number of extensions: 3970
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)