Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060491.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.1  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    23   9.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.0  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 284 VSEQKFLTQDFILAFGDLLDMEEISKNYNNLV 379
           + E  F+TQ F+L   D+ D E I K + +++
Sbjct: 146 LGEGNFVTQSFLLLVEDINDNEPIFKPFASVL 177


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/52 (23%), Positives = 22/52 (42%)
 Frame = +2

Query: 158  RMLRTRRFYSRVSQQIGLENYFNFAVVDNNRQRFKSHLIWSLVSEQKFLTQD 313
            ++++ + F+     ++    Y  F          KS  IW  + E+ FLT D
Sbjct: 2278 QLIKAKYFHGLEELKLAPLTYHTFHKEIKGIDEAKSKNIWDALREKSFLTTD 2329


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +2

Query: 260  KSHLIWSLVSEQKFLTQDFILAFGDLLDMEEISKNYNNLVLSVQQKYAHKLNW---KRIV 430
            KS  IW  + E+ FLT D       L    E +K+  N  +  Q +Y+H L     K I 
Sbjct: 2322 KSKKIWDALREKSFLTTD--CTNPSLCHGREGTKSIFNDFIH-QHRYSHHLKLMLSKAIS 2378

Query: 431  ASHILLKEWFKEPIKQYID 487
            A   L  + F+E   ++I+
Sbjct: 2379 ARKGLDVKTFEEKCTRWIE 2397


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 458 FKEPIKQYIDYDY 496
           F+EPI +Y+DY +
Sbjct: 159 FQEPIAKYLDYHF 171


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 676 SDHGMLWAINFSSCTRXSRKQ 614
           S+HGMLW  +   C     KQ
Sbjct: 219 SEHGMLWVNHLKVCFDKITKQ 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,729
Number of Sequences: 2352
Number of extensions: 16679
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)