Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060489.seq
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070696-1|AAL48167.1|  103|Drosophila melanogaster RH34413p pro...    78   1e-14
AE014296-2229|AAF49856.1|  103|Drosophila melanogaster CG11267-P...    78   1e-14
AY075297-1|AAL68164.1|  102|Drosophila melanogaster AT30951p pro...    68   1e-11
AE014297-1794|AAF55015.1|  102|Drosophila melanogaster CG9920-PA...    68   1e-11

>AY070696-1|AAL48167.1|  103|Drosophila melanogaster RH34413p
           protein.
          Length = 103

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
 Frame = +2

Query: 257 VGPGARKEN-GDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 421
           VGPG R  + G+ IP+ V  GD+VLLPE+GGTKV+LE D+KE  LFRESDILAK+E
Sbjct: 48  VGPGTRNASTGNHIPIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 19/30 (63%), Positives = 28/30 (93%)
 Frame = +1

Query: 118 MANAVKRLVPLLDRVLIKRAEAITKTAGGL 207
           MA A+K+++P+LDR+LI+RAEA+TKT GG+
Sbjct: 1   MAAAIKKIIPMLDRILIQRAEALTKTKGGI 30


>AE014296-2229|AAF49856.1|  103|Drosophila melanogaster CG11267-PA
           protein.
          Length = 103

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
 Frame = +2

Query: 257 VGPGARKEN-GDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 421
           VGPG R  + G+ IP+ V  GD+VLLPE+GGTKV+LE D+KE  LFRESDILAK+E
Sbjct: 48  VGPGTRNASTGNHIPIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 19/30 (63%), Positives = 28/30 (93%)
 Frame = +1

Query: 118 MANAVKRLVPLLDRVLIKRAEAITKTAGGL 207
           MA A+K+++P+LDR+LI+RAEA+TKT GG+
Sbjct: 1   MAAAIKKIIPMLDRILIQRAEALTKTKGGI 30


>AY075297-1|AAL68164.1|  102|Drosophila melanogaster AT30951p
           protein.
          Length = 102

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +2

Query: 257 VGPGARKENG-DFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 421
           VGPGAR   G   + V V  GD+VLLP+YGGTKV ++ D++EY LFRESDILAK+E
Sbjct: 48  VGPGARNPAGAGHLSVGVKEGDRVLLPKYGGTKVDMD-DKREYVLFRESDILAKLE 102



 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 16/30 (53%), Positives = 25/30 (83%)
 Frame = +1

Query: 118 MANAVKRLVPLLDRVLIKRAEAITKTAGGL 207
           M+N +K+++P+LDR+LI+R E  T TAGG+
Sbjct: 1   MSNVIKKVIPMLDRILIQRFEVKTTTAGGI 30


>AE014297-1794|AAF55015.1|  102|Drosophila melanogaster CG9920-PA
           protein.
          Length = 102

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +2

Query: 257 VGPGARKENG-DFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 421
           VGPGAR   G   + V V  GD+VLLP+YGGTKV ++ D++EY LFRESDILAK+E
Sbjct: 48  VGPGARNPAGAGHLSVGVKEGDRVLLPKYGGTKVDMD-DKREYVLFRESDILAKLE 102



 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 16/30 (53%), Positives = 25/30 (83%)
 Frame = +1

Query: 118 MANAVKRLVPLLDRVLIKRAEAITKTAGGL 207
           M+N +K+++P+LDR+LI+R E  T TAGG+
Sbjct: 1   MSNVIKKVIPMLDRILIQRFEVKTTTAGGI 30


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,124,488
Number of Sequences: 53049
Number of extensions: 482727
Number of successful extensions: 918
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)