Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060488.seq
(686 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43940.1 68418.m05376 alcohol dehydrogenase class III / gluta... 90 1e-18
At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical t... 75 6e-14
At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar... 66 2e-11
At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar... 63 1e-10
At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar... 58 7e-09
At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar... 57 1e-08
At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar... 57 1e-08
At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar... 57 1e-08
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar... 56 2e-08
At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar... 52 3e-07
At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar... 45 4e-05
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen... 42 5e-04
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen... 42 5e-04
At4g37970.1 68417.m05366 mannitol dehydrogenase, putative simila... 32 0.41
At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative... 31 0.72
At4g14905.2 68417.m02290 kelch repeat-containing F-box family pr... 27 8.8
At4g14905.1 68417.m02289 kelch repeat-containing F-box family pr... 27 8.8
At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putativ... 27 8.8
>At5g43940.1 68418.m05376 alcohol dehydrogenase class III /
glutathione-dependent formaldehyde dehydrogenase /
GSH-FDH (ADHIII) identical to gi:1143388
Length = 379
Score = 89.8 bits (213), Expect = 1e-18
Identities = 56/149 (37%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Frame = +1
Query: 256 DAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPK 435
DAYT SGKDPEG+FP +L T V+ GDHV+P Y +C CKFC + K
Sbjct: 50 DAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGK 109
Query: 436 TNLCQKVRSTQGQGVMPDGTRRFRLKDRNSTISWVVQHSVSTQLF*KFLSV------KLQ 597
TNLC KVRS G G+M + K R S + H + T F ++ V K+
Sbjct: 110 TNLCGKVRSATGVGIMMNDR-----KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKID 164
Query: 598 RRLH*IKFCFAGMRCTYRLWSRLNTXKVE 684
K C G L + NT KVE
Sbjct: 165 PTAPLDKVCLLGCGVPTGLGAVWNTAKVE 193
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2
Query: 110 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
M+T G+VI C AAVA+E KPL IE+++V PP+AGEVR+KI T +CH
Sbjct: 1 MATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCH 48
>At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical to
alcohol dehydrogenase GI:469467 from (Arabidopsis
thaliana)
Length = 379
Score = 74.5 bits (175), Expect = 6e-14
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +2
Query: 110 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
MST G++I+C AAVAWEAGKPL IEE+EV PP+ EVR+KI T +CH
Sbjct: 1 MSTTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCH 48
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 DAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPK 435
D Y K +FP + T ++PGDHV+P++ +C C+ C + +
Sbjct: 50 DVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEE 109
Query: 436 TNLCQKVR-STQGQGVMPDGTRRFRLKDR 519
+N+C +R +T+ G++ DG RF + +
Sbjct: 110 SNMCDLLRINTERGGMIHDGESRFSINGK 138
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 507 LKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKV 620
+ G+ +YHF+G STFS+YTVV + K+ APLDKV
Sbjct: 135 INGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKV 172
>At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GI:551257 from [Nicotiana tabacum]
Length = 396
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 110 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
M T GKVI C AAVAW AG+PL +E+++VDPP+ EVR++I T +CH
Sbjct: 17 METQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICH 64
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 370 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRLKDRNSTI 531
GDHV+P++ +C C+ C NLC++ R + VM DG RF N I
Sbjct: 105 GDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPI 159
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 522 LYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKV 620
+YHF+ STFS+YTV+ + KV PL+K+
Sbjct: 159 IYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKI 191
>At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 386
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +2
Query: 116 TVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
T GK I+C AA+ +AG+PL IEEI+VDPP+A EVR+KI T +CH
Sbjct: 7 TEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCH 52
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 283 PEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQK 453
P FP +L K GD V+P++ PQC CK C++PK+N C K
Sbjct: 64 PLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTK 120
Score = 34.3 bits (75), Expect = 0.077
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 510 KGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLD 614
+G++++HF+ S+F++YTVV L K++ P+D
Sbjct: 142 RGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVD 176
>At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 381
Score = 57.6 bits (133), Expect = 7e-09
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +2
Query: 125 KVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVC 250
+VI C AAVAW AG+PL +EE+EV PP+ E+R+K+ T +C
Sbjct: 12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLC 53
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 268 LSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLC 447
LS + + + P + T + GDHV+ ++ +C +C+ C++ K+N+C
Sbjct: 57 LSAWESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMC 116
Query: 448 QKVRSTQGQGVM-PDGTRRFRLKDR 519
Q V + +G+M D RF +K +
Sbjct: 117 Q-VLGMERKGLMHSDQKTRFSIKGK 140
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 507 LKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKV 620
+KG+ +YH+ S+FS+YTVV KV APL K+
Sbjct: 137 IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKI 174
>At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +2
Query: 122 GKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
GK I+C AAV+ + G+ L IEEI VDPP+A EVR+KI T +CH
Sbjct: 12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCH 55
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 513 GQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDK 617
G+++YHF+ S+FS+YTVV L K++ P+DK
Sbjct: 146 GEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDK 180
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +1
Query: 283 PEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQK 453
P FP +L + GD V+P++ P C C+ C + K+N C +
Sbjct: 67 PLARFPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCAR 123
>At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +2
Query: 122 GKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
GK I+C AAV+ + G+ L IEEI VDPP+A EVR+KI T +CH
Sbjct: 12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCH 55
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 513 GQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDK 617
G+++YHF+ S+FS+YTVV L K++ P+DK
Sbjct: 146 GEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDK 180
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +1
Query: 283 PEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQK 453
P FP +L + GD V+P++ P C C+ C + K+N C +
Sbjct: 67 PLARFPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCAR 123
>At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 388
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +2
Query: 113 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
S GK I C AA+ +AG+ L IE+I VDPP+A EVR+KI T +CH
Sbjct: 8 SNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCH 54
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 283 PEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQK 453
P FP +L K GD V+P++ P C CK C + KTN C +
Sbjct: 66 PISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDR 122
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 513 GQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDK 617
G+ ++HF+ S+FS+YTVV L K++ P+DK
Sbjct: 145 GEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK 179
>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GB:CAA37333 GI:297178 from
[Solanum tuberosum]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 394
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = +2
Query: 116 TVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
T GKVI C AAV W PL I+EI VDPP+ EVRVKI + +CH
Sbjct: 4 TQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICH 49
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +1
Query: 280 DPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 459
+ E FP +L VK GD+V+P + +C CK C ++NLC++
Sbjct: 60 EAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYH 119
Query: 460 STQGQGVM-PDGTRRFRL---KDRNSTISWVVQHSVSTQLF 570
+ VM DG RF KD S+ S + H ++T F
Sbjct: 120 VDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTF 160
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 510 KGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKV 620
+ Q +YHF+ STF++YTV+ + K+ +PL ++
Sbjct: 147 QSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQM 183
>At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 390
Score = 52.4 bits (120), Expect = 3e-07
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Frame = +2
Query: 98 SSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHMTRIHSPE 277
SS+ + K I+C AAV+ +AG+PL +EEI V PP+ EVR++I T +CH
Sbjct: 6 SSSDNKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKL 65
Query: 278 KILRECF---L*YWDMKAAESWRVSVRESLQSSPGTT*YLCTSHSATHVNSA*IRKLICA 448
++ CF L + + ES +V+E ++ ++ S + +C+
Sbjct: 66 QVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSH--KSNLCS 123
Query: 449 RRFVLLKVKV*CQMALGDSA*RTGTLPFHGLFNIQSVHSCSRNFSL*SCRGGSIR*SF-- 622
+ KV M D++ R L LF+ +V S S L I S
Sbjct: 124 K----FPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPP 179
Query: 623 ---VLLGCGVPTGYGAA 664
LL CGV TG GAA
Sbjct: 180 SRACLLSCGVSTGVGAA 196
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 283 PEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQK 453
P FP +L V GD V+P ++P C C C + K+NLC K
Sbjct: 68 PPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSK 124
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 507 LKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAP 608
L G+ L+HF+ S+FS+YTV+ ++ K+ + P
Sbjct: 145 LNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIP 178
>At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 352
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 268 LSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLC 447
LS + + + P + T + GDHV+ ++ +C +C+ C++ K+N+C
Sbjct: 28 LSAWESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMC 87
Query: 448 QKVRSTQGQGVM-PDGTRRFRLKDR 519
Q V + +G+M D RF +K +
Sbjct: 88 Q-VLGMERKGLMHSDQKTRFSIKGK 111
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 507 LKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKV 620
+KG+ +YH+ S+FS+YTVV KV APL K+
Sbjct: 108 IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKI 145
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 179 IEEIEVDPPKAGEVRVKITATGVC 250
+EE+EV PP+ E+R+K+ T +C
Sbjct: 1 MEEVEVSPPQPLEIRIKVVCTSLC 24
>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 146 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
AV E KPL+IEE + PK+ E+ +K A GVCH
Sbjct: 59 AVYREPNKPLTIEEFHIPRPKSNEILIKTKACGVCH 94
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 370 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPDGTRRFRLKDRNSTI 531
G VV ++ C TC +C +LC+ + + +G + DG R L+ +S +
Sbjct: 138 GSRVVGAFIMPCGTCSYCAKGHDDLCEDFFAYNRAKGTLYDGETRLFLRHDDSPV 192
>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 146 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCH 253
AV E KPL+IEE + PK+ E+ +K A GVCH
Sbjct: 59 AVYREPNKPLTIEEFHIPRPKSNEILIKTKACGVCH 94
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 370 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPDGTRRFRLKDRNSTI 531
G VV ++ C TC +C +LC+ + + +G + DG R L+ +S +
Sbjct: 138 GSRVVGAFIMPCGTCSYCAKGHDDLCEDFFAYNRAKGTLYDGETRLFLRHDDSPV 192
>At4g37970.1 68417.m05366 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 363
Score = 31.9 bits (69), Expect = 0.41
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 DAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNP 432
D + L + ++P+V + GD V V V C TC+ C
Sbjct: 54 DLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCRED 113
Query: 433 KTNLCQKVRSTQGQGVMPDGT 495
+ N C K +T GV DGT
Sbjct: 114 QENYCTKAIATY-NGVHHDGT 133
>At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative
similar to zeta-crystallin homolog TED2 from Zinnia
elegans [gi:531096]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 406
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 113 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGV 247
S+ K++K + + L E++EV PK GE+RVK A G+
Sbjct: 78 SSEKKMVKGIRVYEHGGPEVLKWEDVEVGEPKEGEIRVKNKAIGL 122
>At4g14905.2 68417.m02290 kelch repeat-containing F-box family
protein contains Pfam PF01344: Kelch motif (2 copies)
and PF00646: F-box domain; similar to putative SKP1
interacting partner 6 (GP:21689879) (SKIP6) {Arabidopsis
thaliana}|19798784|gb|AU230074.1|AU230074
Length = 372
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 567 QLCTD*MLNNP*NGRVPVL*AESPSAIWHHTLTLSR 460
Q CT M+N+ GR+ +L +SP+ IW + + R
Sbjct: 305 QSCTGRMVNH--GGRLAILFKKSPTEIWRTEIAIER 338
>At4g14905.1 68417.m02289 kelch repeat-containing F-box family
protein contains Pfam PF01344: Kelch motif (2 copies)
and PF00646: F-box domain; similar to putative SKP1
interacting partner 6 (GP:21689879) (SKIP6) {Arabidopsis
thaliana}|19798784|gb|AU230074.1|AU230074
Length = 372
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 567 QLCTD*MLNNP*NGRVPVL*AESPSAIWHHTLTLSR 460
Q CT M+N+ GR+ +L +SP+ IW + + R
Sbjct: 305 QSCTGRMVNH--GGRLAILFKKSPTEIWRTEIAIER 338
>At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl-alcohol dehydrogenase GB:AAC35846
[Medicago sativa], SP|Q08350 [Picea abies]
Length = 355
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 364 KPGDHV-VPLYVPQCNTCKFCLNPKTNLCQK 453
K GDHV V YV C C++C + C K
Sbjct: 87 KVGDHVGVGTYVNSCRECEYCNEGQEVNCAK 117
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,026,691
Number of Sequences: 28952
Number of extensions: 310757
Number of successful extensions: 778
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -