Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060487.seq
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003185-1|AAH03185.1| 217|Homo sapiens coenzyme Q7 homolog, ub... 69 2e-11
BC043272-1|AAH43272.1| 194|Homo sapiens COQ7 protein protein. 68 3e-11
AK024291-1|BAB14876.1| 217|Homo sapiens protein ( Homo sapiens ... 68 3e-11
AF374413-1|AAM21346.1| 179|Homo sapiens placental protein KG-20... 68 3e-11
AF098948-1|AAD43648.1| 217|Homo sapiens COQ7 protein protein. 68 3e-11
AF032900-1|AAC69451.1| 179|Homo sapiens timing protein CLK-1 pr... 68 3e-11
U81276-1|AAC51120.1| 46|Homo sapiens CLK-1 protein. 68 4e-11
AK123294-1|BAC85575.1| 210|Homo sapiens ne. protein. 30 6.7
>BC003185-1|AAH03185.1| 217|Homo sapiens coenzyme Q7 homolog,
ubiquinone (yeast) protein.
Length = 217
Score = 68.5 bits (160), Expect = 2e-11
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 259 MWDQEKKHREKFEQLINEYRVRPTVLTPIWNVAGFVLGAGTGSSAK 396
MWDQEK H +KF +L+ +RVRPTVL P+WNV GF LGAGT K
Sbjct: 86 MWDQEKDHLKKFNELMVTFRVRPTVLMPLWNVLGFALGAGTALLGK 131
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = +2
Query: 149 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIR 256
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+I+
Sbjct: 49 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQ 84
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 384 LLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEILEXXXXXXXXXXXXXXXXXX 560
LLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L+
Sbjct: 128 LLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELLQLIKKFRDEELEHHDIGLD 187
Query: 561 XXXXXXXXXXXLTELIKAGLRAAIQLSKKI 650
L +I+AG R AI LS+++
Sbjct: 188 HDAELAPAYAVLKSIIQAGCRVAIYLSERL 217
>BC043272-1|AAH43272.1| 194|Homo sapiens COQ7 protein protein.
Length = 194
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 259 MWDQEKKHREKFEQLINEYRVRPTVLTPIWNVAGFVLGAGTGSSAK 396
MWDQEK H +KF +L+ +RVRPTVL P+WNV GF LGAGT K
Sbjct: 63 MWDQEKDHLKKFNELMVMFRVRPTVLMPLWNVLGFALGAGTALLGK 108
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = +2
Query: 149 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIR 256
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+I+
Sbjct: 26 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQ 61
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 384 LLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEILEXXXXXXXXXXXXXXXXXX 560
LLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L+
Sbjct: 105 LLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELLQLIKKFRDEELEHHDIGLD 164
Query: 561 XXXXXXXXXXXLTELIKAGLRAAIQLSKKI 650
L +I+AG R AI LS+++
Sbjct: 165 HDAELAPAYAVLKSIIQAGCRVAIYLSERL 194
>AK024291-1|BAB14876.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ14229 fis, clone NT2RP3004155, highly similar to
Homo sapiens COQ7 protein mRNA. ).
Length = 217
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 259 MWDQEKKHREKFEQLINEYRVRPTVLTPIWNVAGFVLGAGTGSSAK 396
MWDQEK H +KF +L+ +RVRPTVL P+WNV GF LGAGT K
Sbjct: 86 MWDQEKDHLKKFNELMVMFRVRPTVLMPLWNVLGFALGAGTALLGK 131
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = +2
Query: 149 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIR 256
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+I+
Sbjct: 49 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQ 84
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 384 LLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEILEXXXXXXXXXXXXXXXXXX 560
LLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L+
Sbjct: 128 LLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELLQLIKKFRDEELEHHDIGLD 187
Query: 561 XXXXXXXXXXXLTELIKAGLRAAIQLSKKI 650
L +I+AG R AI LS+++
Sbjct: 188 HDAELAPAYAVLKSIIQAGCRVAIYLSERL 217
>AF374413-1|AAM21346.1| 179|Homo sapiens placental protein KG-20
protein.
Length = 179
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 259 MWDQEKKHREKFEQLINEYRVRPTVLTPIWNVAGFVLGAGTGSSAK 396
MWDQEK H +KF +L+ +RVRPTVL P+WNV GF LGAGT K
Sbjct: 48 MWDQEKDHLKKFNELMVMFRVRPTVLMPLWNVLGFALGAGTALLGK 93
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = +2
Query: 149 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIR 256
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+I+
Sbjct: 11 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQ 46
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 384 LLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEILEXXXXXXXXXXXXXXXXXX 560
LLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L+
Sbjct: 90 LLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELLQLIKKFRDEELEHHDIGLD 149
Query: 561 XXXXXXXXXXXLTELIKAGLRAAIQLSKKI 650
L +I+AG R AI LS+++
Sbjct: 150 HDAELAPAYAVLKSIIQAGCRVAIYLSERL 179
>AF098948-1|AAD43648.1| 217|Homo sapiens COQ7 protein protein.
Length = 217
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 259 MWDQEKKHREKFEQLINEYRVRPTVLTPIWNVAGFVLGAGTGSSAK 396
MWDQEK H +KF +L+ +RVRPTVL P+WNV GF LGAGT K
Sbjct: 86 MWDQEKDHLKKFNELMVMFRVRPTVLMPLWNVLGFALGAGTALLGK 131
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = +2
Query: 149 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIR 256
+D+IIRVDHAGE GA+RIYAGQMAVLGRT+ GP+I+
Sbjct: 49 VDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQ 84
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 384 LLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEILEXXXXXXXXXXXXXXXXXX 560
LLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L+
Sbjct: 128 LLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELLQLIKKFRDEELEHHDIGLD 187
Query: 561 XXXXXXXXXXXLTELIKAGLRAAIQLSKKI 650
L +I+AG R AI LS+++
Sbjct: 188 HDAELAPAYAVLKSIIQAGCRVAIYLSERL 217
>AF032900-1|AAC69451.1| 179|Homo sapiens timing protein CLK-1
protein.
Length = 179
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 259 MWDQEKKHREKFEQLINEYRVRPTVLTPIWNVAGFVLGAGTGSSAK 396
MWDQEK H +KF +L+ +RVRPTVL P+WNV GF LGAGT K
Sbjct: 48 MWDQEKDHLKKFNELMVMFRVRPTVLMPLWNVLGFALGAGTALLGK 93
Score = 62.1 bits (144), Expect = 2e-09
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 384 LLGKEAAMACTVAVETVIVDHYNDQLRTLM-QDPNVDKEILEXXXXXXXXXXXXXXXXXX 560
LLGKE AMACTVAVE I HYN+Q+RTLM +DP +E+L+
Sbjct: 90 LLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELLQLIRKFRDEELEHHDIGLD 149
Query: 561 XXXXXXXXXXXLTELIKAGLRAAIQLSKKI 650
L +I+AG R AI LS+++
Sbjct: 150 HDAELAPAYAVLKSIIQAGCRVAIYLSERL 179
Score = 60.9 bits (141), Expect = 4e-09
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +2
Query: 149 LDQIIRVDHAGELGADRIYAGQMAVLGRTAEGPLIR 256
+D+IIRVDHAGE GA+RIYAGQM VLGRT+ GP+I+
Sbjct: 11 VDRIIRVDHAGEYGANRIYAGQMRVLGRTSVGPVIQ 46
>U81276-1|AAC51120.1| 46|Homo sapiens CLK-1 protein.
Length = 46
Score = 67.7 bits (158), Expect = 4e-11
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +1
Query: 259 MWDQEKKHREKFEQLINEYRVRPTVLTPIWNVAGFVLGAGT 381
MWDQEK H +KF +L+ +RVRPTVL P+WNV GF LGAGT
Sbjct: 2 MWDQEKDHLKKFNELMVMFRVRPTVLMPLWNVLGFALGAGT 42
>AK123294-1|BAC85575.1| 210|Homo sapiens ne. protein.
Length = 210
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -1
Query: 281 CFFSWSHM--CG*GVLQLCGPRLPFVPR 204
C SH+ C L LCGPR P VPR
Sbjct: 101 CLLGISHLPTCACSRLALCGPRFPHVPR 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,064,550
Number of Sequences: 237096
Number of extensions: 2184683
Number of successful extensions: 6079
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6068
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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