Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060486.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    25   2.2  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     25   2.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   2.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.8  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   6.8  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 621 GFSXFRFTVECGDGSRELRHGMQF 550
           GFS FR  V CG   R +  G  +
Sbjct: 58  GFSIFRIRVRCGGRKRPVHKGCTY 81


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 180 ILQEKIPKEQEKIREFRKKHGST 248
           +L EK+ KE  K+R F KK  +T
Sbjct: 247 LLCEKVVKEDIKVRFFEKKGNAT 269


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 288 MPP-YIISTVTSRL*WNHASFGIRGSSLVLWESFPGE 181
           MPP + +STVT  L W + S  +   +  +  +FP E
Sbjct: 1   MPPSFNLSTVTYELIWGNVSAALENFTASMAGAFPFE 37


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 339 SSASSTEVSQTRPLIPRMPPYIISTVTSR 253
           SSASST ++ + P+    PP   S++ SR
Sbjct: 516 SSASSTSLNHSNPISSSAPP---SSIVSR 541


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 339 SSASSTEVSQTRPLIPRMPPYIISTVTSR 253
           SSASST ++ + P+    PP   S++ SR
Sbjct: 517 SSASSTSLNHSNPISSSAPP---SSIVSR 542


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,719
Number of Sequences: 2352
Number of extensions: 12817
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)